jgi.p|Nanoce1779_2|564218, gene_2722 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|564218
Unique Namegene_2722
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:1027917..1030416 +

Link to JBrowse

Properties
Property NameValue
TranscriptId564304
ProteinId564218
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:1027917..1030416 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0005509calcium ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|564218mRNA_2722-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|564218mRNA_2722Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|564218

>mRNA_2722-protein ID=mRNA_2722-protein|Name=jgi.p|Nanoce1779_2|564218|organism=Nannochloropsis oceanica|type=polypeptide|length=636bp
MTTLDDPSHLDKTLWDVPDDAAAPTTPPLLARFSTVHSAAALAWEERLWK
EVPQALWDKIVMRDGVPGLCDSKAISKALNKALYDPRIHKYVDSTDDGLR
RFFDVLDTNLDNNLQKEELYEAFRRILNDFGVWNGGRAEFRAYWEATWAQ
ILDVLAGMVLVAPQGESEEQVEMGPFCFEAFAVLLRRLKLELALRVWEKD
GSLETMPSAVQKSMVKIDIKGRIDGNKRFASETEVNHRKYRGAGTRTSHI
TPAAATTEWARRLSSLMQLEEEEVVFKTYTWNARTVMCLDVSRRHMRDFF
LCHRGPEWTMRWVIADSSDRANIIRLSIKYRFHPLHLEDVLNMERQQPRF
LKYGGHYFVILPLLRLIPESVKEEGGKEGAPTGADSTTVCDGGGVFGPGK
QGSPLTSIRFDSEDHIIVPAIEEPLAAECSPSGAPTSVLEEAARLLHEDY
SNVRHGNSNWMLHAMVETTTKMLVPIVAAYDRRLRLFRDELDGPDAVRMR
ERLSKPIMDVKHDLIWLQKKVKSMKPVLRSLIGCPKLAGDGGGEVVFYLQ
GVDDDLEILSDDINTMLVLAQGLLDESKYLKDDTRNEALKLFAVMTATFC
PLQFLTGYFGTNFWGTYVWEETEEAVSISVVSHFI*
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Synonyms
Publications