jgi.p|Nanoce1779_2|525085, gene_2716 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|525085
Unique Namegene_2716
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:1013625..1018788 +

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Properties
Property NameValue
TranscriptId525171
ProteinId525085
Product nameDSHCT (NUC185) domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:1013625..1018788 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525085mRNA_2716-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525085mRNA_2716Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|525085

>mRNA_2716-protein ID=mRNA_2716-protein|Name=jgi.p|Nanoce1779_2|525085|organism=Nannochloropsis oceanica|type=polypeptide|length=876bp
MDYPFQLDDFQRQAIARLERGEYVFVAAHTSAGKTVVAEYAIALCASHMT
RAIYTSPIKALSNQKYRDFKEKFGERNVGLITGDVSVNPDGSCLIMTTEI
LRSMLYRGADLIRDIEWVIFDEVHYVNDTERGVVWEEVIIMLPAHVSLIF
LSATTPNTAEFGDWIGRIRQRPVHIISTTYRPVPLSHSLFAGGELFKVLD
AKRPFSTAMYQKAQEPPLRGIGGGGGRWVDGAGSKTQWQSLVKRLKKDGL
LPCVVFNFSKKKCEECADYLGGEDLNAAREKSQVHIFTSSAIKRLQAKDQ
HLPQVIRVLELCERGIGVHHGGLLPLLKEIVEILFSKGLIKILFATETFA
MGVNMPARTVVFNSLRKHDGREFRDLLPGEYTQMAGRAGRRGLDKVGTVI
LTCWKEVPPAPTLSRMLTGKATLLSSQFRLTYNMILNLLRTEDLSVEDMI
KRSFSEFATQRALGARDLPLLLAKTHKALERERGEEPFEVYGSVGSRYYA
LVSLRLEDVIVVTNRRRKQRLDTEGILATGRAMQHAAKQQAGTSSLPPSF
PSSSTSSSVIMDVMDELLKTEKEEAKALAEDSLPPSLPLDPLNFPKDLKI
NDLDFMQSYSRLLPGQQALLSSKCHTCPLLLSQYTHIHRLRRLEQKASQL
EHWLSNESLALFPDFQQRLAVLGALGYIDLNSQVVQLKGRAACEVNTCEE
LLLTEMVFDNVLEPLEPAEIAGLLSVFVCQEKSGKEEGGGKGTVLDVDSK
AGQAIPPALRVACGKVLEIARHLGDVQRCFNLPTDPESFATQHVNLALVD
VVYEWARGVNFKDIMEISTVQEGSIVRCITRLDELCREVRNAARMMGDPA
LYRKMEVVSQSIKRDIVFAGSLYLS*
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Synonyms
Publications