jgi.p|Nanoce1779_2|624998, gene_2555 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|624998
Unique Namegene_2555
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:646636..651730 -

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Properties
Property NameValue
TranscriptId625084
ProteinId624998
Product namepolyribonucleotide nucleotidyltransferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:646636..651730 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004654polyribonucleotide nucleotidyltransferase activity
GO:00001753'-5'-exoribonuclease activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006402mRNA catabolic process
GO:0006396RNA processing
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02290NO07G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624998mRNA_2555-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624998mRNA_2555Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|624998

>mRNA_2555-protein ID=mRNA_2555-protein|Name=jgi.p|Nanoce1779_2|624998|organism=Nannochloropsis oceanica|type=polypeptide|length=788bp
MQSCDWDDTNIKNDASKLSAVSAESTLGNIPSPCGQANYGFTSSHQAFLQ
LQGWQMCHDMKSGIQGRLGIGSGNDDEAEDRVSSRQCDGSAVGRQGGCLV
LATAVSDRGSSGAGDDFLPLVVEYREKAHAFGRINRSVNRREGAQSDQEI
LASRVVDRVIRPLFPEGYIYDTQVVTTVESTDRQNDLTVLAVNTASAALT
VSDIPWDGPVGCVRVGMTAKGKLLINPTEDQMQESRLNLLYAGNEKRTLM
IEAGGDQVPEIEMVRALKFAHFHCGAIIQAQKQLAAQIGASKRVVSPTLP
SPVMWSRAEEVGYQKAVALFSDMKLSKSDRSRAEGALHGEIRTALKLEVP
DCHELAPAMCSDKILRRGLRDAALGSRLRCDGRKFTELRRISSAADVLPS
VHGSSVFTRGETQVLCAVTLGSEDDAIKARYTDEDEVPGKKAFLHYDFPP
YSVNETGKVFGSNRRMVGHGALAERAILPVLPSSDVFPYTIRVTSEVTAS
NGSSSMASACAASLALMDAGVPVKAAVAGVSIGLLSPPGNGAEEREARLI
VDILGTEDHYGDMDFKVAGTSAGITAMQLDIKLVGGVPLETLCEGIHLAA
RSRRQILAFMGKTIMEPRATLKASAPGMEVVKYSFEQHKDIFTLENRRLV
EDEYNVRLSFPERGKVTVFGRDPKKVAEAHRHVQELVADIQEGEIYTATV
VEVKDFGAVLEVLRGKEGLMHMSEISHHKAGKMPVEMLAVGQQICAKHGC
VAKLRKQRTKTRTAVEEVGPEKVEGVRGPGESLVGQQ*
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Synonyms
Publications