jgi.p|Nanoce1779_2|580726, gene_2544 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|580726
Unique Namegene_2544
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:617833..624253 -

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Properties
Property NameValue
TranscriptId580812
ProteinId580726
Product namemolybdopterin binding Aldehyde oxidase/xanthine dehydrogenase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:617833..624253 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050302indole-3-acetaldehyde oxidase activity
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0004497monooxygenase activity
GO:0046872metal ion binding
GO:0009055electron transfer activity
GO:0051536iron-sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006725cellular aromatic compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02180NO07G02180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580726mRNA_2544-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580726mRNA_2544Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|580726

>mRNA_2544-protein ID=mRNA_2544-protein|Name=jgi.p|Nanoce1779_2|580726|organism=Nannochloropsis oceanica|type=polypeptide|length=1903bp
MAGPRDQPEEKLAPQVAASPSARNKSPQQMLPTAGPLIFTVNGKKVVLAP
GTWNISQSLNEYLRAQLLMRGTKIACGEGGCGSCAVIVSRKATTATSLNQ
DICLAVNSCLRPLASLHGWNVTTVEGLRDQQQGAAVQTRISRFNGSQCGF
CTPGMVVSLCAQLHKDDGDGCNSTDNPSSLTSTITKESLARSLDGNLCRC
TGYRPILDAAVSFLPAAADLGDLEDMMGKLECLAMRRGKSEDKKIRCDVG
SGAGAVASVDLMDAPSSSPSYLVFEGTGGDRWYQPQDLAELFHVLSWHPE
ACLIAGNTGRSGVYKQDKEMDEAAATAAAVNTPVALVSFQDVRELHGYIW
EVKTGWLEVGAGLTLSELVDVLKGLPETAFSSSILRDALLAHLHRVAGTL
VRNAGSLGGNLYIAKSKHFDSDLSTLMGGLGAMVRVAWGPGWAEKELPWL
DYLNGNEDEDGTEEEARPRRDILLRVRFRLWDPRARGKVDVFQSYRAALR
KGNSHAFANAAFRATIDSVTGRLENVSLCMGALGMPALRSKDAEEALISA
SADSVSAGTDPLGQASLEAALLALRKELIPANKTRYRYRVELLSGFLYKF
FLYLKCQVVSSASSPSLDVRLLSAATVPDVPVALKSSEQTYTRRWMTKDG
EASSSDSSTIDYDHLPYVALPKDYQGFQASGQAVYVSDVLELEGTLFGAY
AKSPRSVGVLTELQVSAAKAMPGVVAVLTAADVPGTNDCAFYFGSPDVAA
PDTVFVPLGGRVRFHSQPLALVVATSTKKAQMAAKLVEAVFDGFEVPLVT
ISDAREAGSSMGIVDGVKRGDAMAVLSRARLEHQKGLAANAIGGLGKSLS
VVEGALRAGSQKHFYLETQTAYAVPDEGRMLVYSSTQAPQAVQEVVARVL
GTAMNTVQVKMRRAGGAFGAKATRNLPHAAAAAVAAKVLARPVRLTLDRA
TDMQLTGGRHAMEAEYAVAYDPVTGLVEAVACQIWLNGGFCADLSFTPCH
DLAANLEQAYFIPHFDASIEVLRTNLPTSTAMRGPGVVQASFIMESILNH
VAAELAGHLTPEEVRRVNFFRPVGEGTDAAPTTMMSAGCMHMPPTPISHF
TLPDIWQRLSASAQLEARRKEVAAFNEANRWRKRGMAMTPIKFLSALMPM
QATVNAYSDGSILIHHGGCEIGQGIHAKSALVALRALAQIGVVEPPTLSM
VQFADTDTDVIPNGGYTAASTTSERACAAVDAACRVMVKRLAPLRDRLMQ
EKENKAKAAAAACACGATEGNNGGHGGGPAVPAPLTWVELVKTALGFRDS
IDLCCHAQWRPGLPGHYHNYGAALTEVEVDVLTGEVTIRAVHLLYDCGKS
INPAADLGQVEGAFVQGLGYYLMEEALIATDGALQSPGTWDYKPPLLADM
PAEWKVGLLENGKFEKGFLSSKASGEPPLVLATSAMMALRHAVTAARKEI
FGSGSAAVHNFRLDAPATPERVHRACGATMGCLSLHGAAGAQPWLDETPR
HHVDVAVAGAGLGGLALAIALDKLGVNAALFERAPALRDVSQGLVGITPN
GLRALELIDPRLKEHLMERGKYNTEAFTKTVDEQGQSTERVVQFEANNVS
IPWADIQHSLARLVPRTMIKCSHDFAGFDEDEDGVTIYFKGRVETARTVM
LVGVDGLFSVVRKGLVPFPDGRGDEVCESGHTNWNAIMKPDEAGLPYPHP
VVSLTYLKEVPPRFFFMIQCGHGRILWQVRVSDPGKEYTVAPKKGHGRLG
LTGVKQRILDMVADVPDVQPYIAATPEETIFERCLLFRKPLQRYSTPGRH
VVLMGDAAHAMHSVRGQGANMTFEDAHCLGLALAAKGVGPAAVRVFERAR
IPRANLVQWESNTYYMRQFEKNTSHTWALKFLNFQSYVADFHKHEALPAH
LL*
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Synonyms
Publications