jgi.p|Nanoce1779_2|525152, gene_2523 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|525152
Unique Namegene_2523
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:554691..557303 +

Link to JBrowse

Properties
Property NameValue
TranscriptId525238
ProteinId525152
Product nameputative adenosylmethionine-8-amino-7-oxononanoate aminotransferase, aminoterminal part
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:554691..557303 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004015adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GO:0008483transaminase activity
GO:0030170pyridoxal phosphate binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02010NO07G02010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525152mRNA_2523-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525152mRNA_2523Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|525152

>mRNA_2523-protein ID=mRNA_2523-protein|Name=jgi.p|Nanoce1779_2|525152|organism=Nannochloropsis oceanica|type=polypeptide|length=841bp
MGLTVFQVFGANTDVGKTVVSAGLLRAALIGPPRRQATYVKPLQTGDVHD
GTFVQRYTPKGVCCHTFFSWSTPVSPHLAAAKEGKTVTGEDLLAKLQAHL
HQAQEEEGNEGREGLKAGRVTLVETAGGVLSPGPSSALQTQADLYRPLRL
PVVLIGDGKLGGIAITLAAYESLYSRGYDVHAIAILDSPDHLNNASAVRT
YINVTLGHSMLPVVSLPPLPPLRTSSSSPSSSSSSSSSFRHLLCVLIERE
EARLQRLRSMPDRAAEVFWYPFTQHRGLKSKNVHVVDSAYGDHYSIIEKR
EEEGEEGEDGCSSRRLIDACASWWTQGLGHGRADVALAVGAAAGRYGHVI
FPGIVHEPALRLAELMLAGPGKGWAERVFFSDNGSTAMEIAVKMALKKAS
TTLSSSVGEEEKGDEGKVQVAVVTQRDCYHGDTLGCMNAAAPTVFNTGQH
PWYQPRTLSLAVPIFGYVQGLLQVEVPWEIVAASSSSSSSSSSSSTVVGV
RLLSFPGGMAALLDMPAREKSELANVYRRAIRTQMDAFEAGEDRDGGHEA
GEDRGGGQGRQPRHMRQPQQRQRRLGAVLLEPVLMGAAGMILVDPLFQRL
LTLEGRARGLPVVFDEVASGLHRLGCASAAELLGVTPDIACYGKTLTGGY
LPLALTLTSEAVFKAFHGPAKSDALLHGHSYTANPLACAAAVRALEAYEA
MHKDRDHQQQLQQQENNSKSTDSDSRRCVHNERQVAALSLIAGVRRAVAL
GTVLAVELDEGKKGRGEGYRSTASVNVVRDLKRAGVYARPLGNVVYLLAS
QVASARTTRILIDALENVLRHRATMVGSENGLEGDGGVVI*
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Synonyms
Publications