jgi.p|Nanoce1779_2|637287, gene_2322 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|637287
Unique Namegene_2322
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:28357..42602 +

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Properties
Property NameValue
TranscriptId637373
ProteinId637287
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:28357..42602 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005260intracellularly ATP-gated chloride channel activity
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872metal ion binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00170NO07G00170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637287mRNA_2322-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637287mRNA_2322Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|637287

>mRNA_2322-protein ID=mRNA_2322-protein|Name=jgi.p|Nanoce1779_2|637287|organism=Nannochloropsis oceanica|type=polypeptide|length=2201bp
MRVSLSVLFTLVGTTLLTARGIPTSSTKSYPTKNKAQARALRETLVTLRD
KEKNGFLSIPQDDPDPAGRSLRLSYRAPFWEFTSYGSIDPELANLTMAAP
AGILGDTALASQGATVTGQLGVSVETGTNVLATPIGAACFSINGTGDCLE
HLDSYLPLYGALAPEYQPAAYTFYDSDYAFARERITSSPAFITRVNSLGD
IPFSQADVTGYDLITGGIPLAKLVAQGRVFIVDFYPLYEKGLLEASPNSF
LEAPTAVFFLNGPLKAKRNGAPKRNARTFKNGPILMPLAIKYNVQQNYVV
SPKDPHADWFLAKAVFNCLDRDVNAIYHFVLHTAISNVAIAAQKHFASEH
PLFQPIQHASAENFGIIFAGVAQLLRTDGSFDTYLSISGSSIKSLLFPYF
MQQFDWRLTNLQTNLKARGVADIPGFLYRDDGAALYDALYKYANKYLAGS
YRKSNSVTNDPELQGFLAALTNSSNSIAYLNGFPSGDDVTSLQDVSALLA
QILWITGVGHHALNSFRILNFDLVYPSHPGKILDLLPASKGTLTDDQVQQ
DYISGAGFSPAQVTSTDHFTPDLTTLSIGNPLSFFIGTQGLAFAFYPLLQ
KPSRLTNIYLSDTENLKTAKAAIVLRRNLRAISARIIKREAGNNNSPNSI
EKPSLGAKAVVKVEKEAGVVPVEPGSSRRQLNVRTAALRDPRFRFSLSSS
SSSSSSSSSFLPSSPSDKEEALSRLVTSLLSLRGGGAQQAAAAAQTVLGP
TTVRPNPSLSSSSPPSAGTSPHFPHSMLMTDGKEEDEEEEKKEASKAFGK
TLPRINFGLLPMGRNGSLWSTLSFGWVDPLMARGNDQPLEMGDLWHVAEE
VREKDRMATLSRDFQAAYAQEAAKATARGVPPITASDEETSRRTTWAHAP
LIRTFLTLFRGPLLTTGVLRMGVSCIQFMPPLLIARLLRLLETGGGLDLQ
AGYRLVFFLAATLVAKTGVENQYYHHLSVMGLQIRALIATAVYQKSLRLS
PRCSAGACRGRASTVGEIVNMMQLDAARLEGVASSVHTLWNGLLDIVVYM
AMLVACMGPSMLAGILIMASVIPLNAVFLGILAKARERTLKSTDSRVKLT
NEVLQGIRSIKSYAWETPFLQQVEAVRAQELSTIMSAAKLRGVLVAFLGA
TPSIVSMVTLWAYISLGNTLSASKVFTALALFNQLRFPLLYYPMVIAAFA
EGRVALSRLQKFLDAPQVERQTTASETSTTTETLSGEVATAAAAAAAAAA
GRGTGIYMNEASFSYGVDRGQHQNNVKSIAMPEEATRLRNCTLSVAPGEV
VAVVGSLGSGKSSLIRALLGEMSLLKEDAREGGREGGVNPHAVREEKGLF
SEVEGGREGMGDECRVRVRGSLAYVPQTAWVPNEAFRDCVLFGSPFDEAR
YQMTIAACALAPDVERLEGGDKTEIGERGVTLSGGQKQRLALARAVYSDA
DVYLLDDPFSALDAQVGRQVFESCLRDSQGPLAGKAVLLVTNQLQFLPFV
DKIVVMGRVEGGGGDVGIIDQGRYWELVARGHDLESMLASSSAAATAAAA
LDTSSTPPSTPVSPVEGEEEGAAAAAAAHANHHHHHHQAPEEEEMESEPL
MAMEEQGVGEEGKAVGKERKKLMKEEERITGAVKATVYKAYLGAVRSPLI
IFLAVISFIVANGTQFLQQAIISAWTSDPLHIKRPASTYLWGVSLMAAMV
AGFNYLRTYLSVLAGVRASDYLHHKALQKVLGAPMRYFDTTPPGLVVDQQ
LPGTLGMFITCVFQLVGTLGAILAATPKFAFALFPVSWIYLSVMNYFRAV
TRELKRLDSLSRSPIYSHFSETLGGLSVIRAFRKEKAFIRANECKVDQNV
RAYISLKAADRWLSVRLELLGACVVALGAVLAVQGAAVGKLGAGLAGLAL
TNALGVTGLLNWAVRCLAETEAMMNSVERVQQLVDSVPSEAPRVLSSPSH
ATGAASLETLQHSAPANRSTDGGGIASRPIKSLQDDALLVASGWPWKGGV
YFRRTVMRYREDTDPILQGFTAAIRPKEKVGIVGRTGAGKSSLFVGLLRL
VEMEHGSVEIDGVDISKVGLSTLRSAISVIPQDPVLFSGTIRTNLDPFQA
YDDAALWSALRKASLEDALRSSPLGLDQPVSEYGENLSSGQRQLLCLARA
LLRRSKILLLDEATSSVDQATDQLIQETIRREFVDCTVLTIAHRLEGREE
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Synonyms
Publications