jgi.p|Nanoce1779_2|299598, gene_2293 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|299598
Unique Namegene_2293
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1305925..1311461 +

Link to JBrowse

Properties
Property NameValue
TranscriptId299684
ProteinId299598
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1305925..1311461 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016891endoribonuclease activity, producing 5'-phosphomonoesters
GO:0004674protein serine/threonine kinase activity
GO:0004713protein tyrosine kinase activity
GO:0004672protein kinase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|299598mRNA_2293-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|299598mRNA_2293Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|299598

>mRNA_2293-protein ID=mRNA_2293-protein|Name=jgi.p|Nanoce1779_2|299598|organism=Nannochloropsis oceanica|type=polypeptide|length=1520bp
MVTSYQGYDLDPSSSSSSSSSSSSSSSSSSSSSSSSIFPVLIPAVDGSLL
VHTPGKGIQRLPLKASQLVERAPFLAADGRTLYTGARVSEALMVDVNTGV
VVQRFSGPSAEKVAHIIDPRTHSPGTPTVTPADTPSPAPSPSTNGRGTSN
GRGGGGARQLLWLGKVEQSLRAVDAVTGHELWNLTVSEITPLFPSGPSSS
FPSSSFSSFSSFSPSSSSSPSSSRVKDTSSSSPPSTALSDPSLHRQPHHN
LLTPTQAAVLDVLGPGPGWGGMGPLIATPEGGLHRRDPSTGRIKLLAPLG
AAPVSAFVVAPEGGREGGMGGGMMVPLTHTFAPLRAGREGGKEKEGEEDE
EDGRSETGSEAEEEEGEEEQQPRYSSSPSVSIGQLPNGRLFGIVLEPSAP
PSSFPSSSSSSATWDGSVLPHYLHHRNALPSPSSLPPSLVSSSTPRPSPP
PPSSTTSCPPSSSRPSLPRIPHPHECPAGYPSSLCSLRSKGGGGGGRGGA
HSHTTAPQQPPPALGGVEGEEEEEEERWKEEGPWVSCRPGDPHFPHCLVG
VHHLLALDPPHPPSSPATPSFSSSTSLSTTTHNQHLFGLPWSRLLDSTNP
PSSFPPSPPPWDWSSPSTWLSHFTPRGRRDFLWLATLLLVFLFLLALQRS
SSNPVFPPPPPPPSSLTRLPSHPIHDADGHLRVGRLAVSLQDVLGYGCHG
TVVFKGRLDQRPVAVKRMLSAFHAAAEREMQLLIESDGHPNVVRYYVREE
SGDFVYLALELCVCSLRDVVVRMERWVEEKAEEEGTKRRGRKHHQPRRHV
FVGELMGRRAGWDDPSSPSSSPSSLASSAAPAPVRGALHQIARGVAHLHS
LRIVHRDLKPHNILLAAASSPSSSSTPPSLPPSSPPTILESLSDLNKYIC
KISDMGVGKLLPLGQSSFGASSFSNHGAFGSHKTPFPAARAAAAAAAAAA
AAATTKAGASPSSPASSSSSLSSREEDNPSSIPQGPGSVGWQAPEAMRGF
YRREGGMEEEEEEEEEEEEKTCNNVASPPPSATSSSRRTQAVDIFSLGCV
FYTVLVPGAHPFGEWFERERNILGAKRDLRGLEGSPDALQLVQAMIEADP
RRRPTARMVLHHPFFWDDERRLAFMVEFSDRIEQEPAESLLALAVEAGAG
EVVGRAWDVQLDRGLLEDLNKYRKYDTASVRDCLRILRNKRHHFNELPSE
VQKLLAPLPGGLYRYWQSKFPRLLMHCHGVCTRLLTRDKLFQTYVGREKD
LCRDYEDDNQALKEGGREGGGGRAADGRPAASSQETLALIHHPPALSSGN
GNQSSPSPPTPRDPATILLLSQIVVFAGSSLASSSSPPSRGWWRASEHWK
RRGDAGKPKARAPHLTRMMTDSRYRTRLCQHWEMTSVPGKGEGGREGEVA
PVCPMRKKNKCDFAHGPVELRVKDGRKARWGWKEGEMGGGDNVLGLARAA
ESSRGGGGGGGGGGRRGGGGNKRRRRERRKSDRKRGKEKRRGRRNRERRR
RRRMEAEEGRRATWRGFGV*
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Synonyms
Publications