jgi.p|Nanoce1779_2|524621, gene_2260 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|524621
Unique Namegene_2260
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1197873..1199901 -

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Properties
Property NameValue
TranscriptId524707
ProteinId524621
Product nameHI0933 family protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1197873..1199901 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04720NO04G04720Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524621mRNA_2260-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524621mRNA_2260Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|524621

>mRNA_2260-protein ID=mRNA_2260-protein|Name=jgi.p|Nanoce1779_2|524621|organism=Nannochloropsis oceanica|type=polypeptide|length=537bp
MDSSSTAGATTPRRGRAEPSFLTSNPCCSSYCCCSSFSSRNLNCLRAAAE
ELDSPNIRRIIVVGGGPGGFMGAIEAGQFLNNKNHPPTHILLLEGSRQLL
HKVSISGGGRCNTMHDANKSIQDITAAYPRGEKELLGPYTSAFGPPQALE
WFRSRGVKLKTEPDGRMFPVTDSSETIVECLKEGARKVGVDVRVGWKVVG
VEVNEEGGEVGGGGGEGGIAAVLTVKVLESNKVLHTISCDALLLATGSSR
EGYALARALGHHVVDPVPSLFTLELADRKSKRPSPLQGLAGISVPCAEIT
LVGPAPKKEEQQHLSQRGPVLITHTGLSGPAILRLSAFAARLLSLLSYRA
SFLLDWVPELSADDIHSRLIRAKAAHAKKSVATFCPLLATTEEGEMIAEP
RLPRRLWARLGGMTWGGMTPTMVLALVGVLKGSVYVSRGKSTHKEEFTTA
GGVATREVDFKTFGSKKVEGVYFAGEILDVDGITGGYNFMNCWCGGYVGG
QSMARRVLELDRERARRVLELGEGGRERRREGQIER*
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Synonyms
Publications