jgi.p|Nanoce1779_2|579463, gene_2204 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|579463
Unique Namegene_2204
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1054473..1056462 +

Link to JBrowse

Properties
Property NameValue
TranscriptId579549
ProteinId579463
Product nameputative dimethyladenosine transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1054473..1056462 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0000154rRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0016433rRNA (adenine) methyltransferase activity
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649rRNA methyltransferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04180NO04G04180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579463mRNA_2204-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579463mRNA_2204Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|579463

>mRNA_2204-protein ID=mRNA_2204-protein|Name=jgi.p|Nanoce1779_2|579463|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MPKFPKERQRQATAGQGPVHRTLISANTSLGQHFLKNPMVVQGIVDKASI
RSTDIVMEVGPGTGNLTVKLLERAKKVIAVEFDTRMVREVLKRVEGTEHG
KNLQVIQGDVLKVALPFFDVCVANIPYQISSPLLFKLLAHRPMFRCAVIM
LQEEFAQRLTAKPGDELYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVDS
RVVRIELRNPPPPVNFSEWDGLVRLVFNRKHKTLHAVMTTKSVLTVLERN
YKTYVALHGKGERGVALPLPVGMEVEKEGGRKEEGKQYEEIRTLVEEVVA
LPAFEGKRAAKMDLDDFLALLAEFNSRGVHFSS*
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Synonyms
Publications