jgi.p|Nanoce1779_2|660119, gene_2197 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|660119
Unique Namegene_2197
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1037369..1044580 -

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Properties
Property NameValue
TranscriptId660205
ProteinId660119
Product nameputative carboxylase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1037369..1044580 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004736pyruvate carboxylase activity
GO:0016874ligase activity
GO:0005524ATP binding
GO:0009374biotin binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006094gluconeogenesis
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04130NO04G04130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660119mRNA_2197-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660119mRNA_2197Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|660119

>mRNA_2197-protein ID=mRNA_2197-protein|Name=jgi.p|Nanoce1779_2|660119|organism=Nannochloropsis oceanica|type=polypeptide|length=1148bp
MAANRGEIATRIMRASSELGIPTVGIFSKEDRFTQHRYKADQAFLVGADK
SPVGAYLDIESIIQTAKKNGVDAIHPGYGLLSENPNFARACTENGIVFVG
PTIEQLNTFGDKTKARELAIKHGVPVVPGTDGPVSTYEDARREIEEMEVG
YPVIIKAAHGGGGRGMRVVRDAGELEENFKRASSEALSAFGNGDVFIEHY
VDQPRHIEVQILGDGRGNVVHLYDRDCSVQRRHQKVVEMAPAQGLSKKTR
EAMFADSLRLTGAAKYLCAGTVEFLVDKKGRHFFIEVNPRVQVEHTVTEE
VTGIDIVQSQIRLAGGASLEDLGLVQEKIKTSGYAMQCRVTTEDPSRDFQ
PDSGSIDVFRVPGGMGVRIDDGPGFVGANITPYYDSLLIKITSKATNRHD
AIMKLQRALKEFRVRGVHTNKSFVLNLLSHPDFIHGQVDTGFIARNPSLL
LPVSSSNRGQKLLTFIGHTIVNGPDPSLGASGPPCSVIDPTIPSLPPPPP
RKDKSLRQIYLDRGPKGFAQAVRKHKGTLITDTTWRDAHQSLLATRVRTR
DLLKISEATSVALAPAYSLENWGGATFDVSMRFLREDPWDRLALMREAVP
DIPFQMLLRGANAVGYTSYPDNVVFKFCELAQKHGMDVFRVFDSLNYLEN
MRLGIDAVGAAGGIIEASICYSGDVSDPTRKPYTLDYYLEFARQLVGLGV
HVLAVKDMAGLLKPEAATLLVTALRREFPDVPLHLHTHDSAGTGVASMIA
GAKAGADAVDAAMDAMSGTTSQPSLGAIVGALKNTPQETGLNMAEINAVN
EYWEEARGLYAPFESGQKSGSSDVYEHEMPGGQLTNLMFQSTQLGLTGQW
AQIKKAYAAANRLLGDIIKVTPSSKVVGDLAQFMVQNNLSEADVRARAEE
LSFPNSVIEYFQGYLGIPPFGFPEPLRTHVLKGRTLPNGKACFDGRPGAE
LPAFAFEDEKQGLLDLYGKHIRDVDVMTYAQYPQVFAKYQQFYKEYDDVS
VLDTRTFLQGMRIGQEVSVELEHGKTLFVKLNGVGEVDATGHRDVIFELN
GQQRVIKTKDLKANVKAVVRPKAELGKPGSVGAPMPGLVVEVKVKTGQEV
KKGQPLLVLSAMKMETVLTSPAAGKIKTLLVGAGDNIAGGDLVVEIE*
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Synonyms
Publications