jgi.p|Nanoce1779_2|550857, gene_215 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|550857
Unique Namegene_215
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:541648..546268 +

Link to JBrowse

Properties
Property NameValue
TranscriptId550943
ProteinId550857
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:541648..546268 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004622lysophospholipase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006629lipid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02270NO01G02270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550857mRNA_215-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550857mRNA_215Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|550857

>mRNA_215-protein ID=mRNA_215-protein|Name=jgi.p|Nanoce1779_2|550857|organism=Nannochloropsis oceanica|type=polypeptide|length=1446bp
MLAMLWAAMSWGWALAKDLPYTSFSLLFSYPKTFTTIAGGFIIAALVLCQ
RLLEKLERLPARTSARSLPSPLLQRHSMSNSNLDEYAETGNRAYGDELLQ
DRKLRHRYRKLKQNWLHQGQKLFRKIRRKGSSSADRVSRRLEDGLESIYS
PMELPQPSKFAREVSSDLILDGMRLNGDSYIAFMAIMNSWKVFGGRDVPL
LLKMCTGVTTLTLSAGGYLFEEGKPLERCLYILKDGELEISVQPDLGLDQ
LQPVHSSSGDRSTTPPLLPPDFLERIDQEGTIISGILDFVALLTESSVAE
YCASARCTTDCRILQVPIIPNNGGQKTSSSISICSGSTRIRSGCTSTSSS
NSNGVSSCTLDQEEEEANAPRNSASAQARCRLIRSCLIRSHRVTLATAYA
YLGVIYDLYPRHPIIPIVGSALSSLSSETRLEDKQQHALKRLIRLVLALD
PDHAIPDLEPCVVPVSSRCIPTSSGGSDGSYAVEPGTVADSRLLQRQERI
AGSPSGLEGGEGRRGNGLCTASLPWNQPRLYLLRRGDSPHELDEQSRTSL
HILVTGRLQVTKVDAMAAAPGVAGQAQGQQGLGRGSSPSGVGKSIFSDNY
GAMRGPLAASMAASPTFPLSSGFKAPGAPTAADSSSAASRGEHGPGAVLG
YSCLLTGAPEDWYSPRGKNRARLRLEASCDSLVVQIPLAFVEKAMKPHPL
ATLALAARKTLETIPKVLRVIDFGVKWKQLQAGEVLVREGQPSDGCLYVL
LYGRARSSIQQRPSASASSPPLQAASDAVEAAKLQQQQEIAQKENVVVVA
DHGRGTLIGETEILTGGIHQVTVQAVRYTSFATIPSSVLSFLIRRHPRVL
AHLAEHVVEKASHNSRHHPFYRDRTPMKMFTLPMPVPAGAADGRRGAGSP
FWASSLASSSSPGARRVVVGEQGAKTILVLPASNGVPMDYFIKTLEGAMV
KARHSVRTVTSALAASVLGLDEDTYYSVAWCRDNVLLLESWLTQQEEQHE
IVLYQSDWEDSEWNRMAAGMADVVLLVGNAADPPGIAHLELILDPFIRSA
QKLLILLHVNPSPYYTPSGTRLWIEKRAGIQQHYHVRMHTQSPQFDQQHI
RSDFARLSRILTGTAVGLVLGGGGARGMAHLGLLRVLEEEGIPIDHIVGV
SIGAFIGGLYAKRSSYLEILPFASRFAQNMSSTWLFIKDFTLPFTSYFNG
YSFGRELEKAFGDTKIEDCWLSFACLTVDLSVSRERVHQNGTLWRYVRAS
MTLAGLLPPLCDVDPKDDAVHYLVDGGYVNNLPADVMKEVFSAETIIACD
IGVEVRMTGRQDYGDTLTGLQVLLHALLPTWVRGGDAETLKAPSMGDISS
QLMYVRSVQQLEQAKESIDCYLRPPVTHFGIMEWKRHVELQSLGYLYCRS
SVRAWREALKKEKGGRGSITAFQTVTSSAGDHMIRGRSLSASQLG*
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Synonyms
Publications