jgi.p|Nanoce1779_2|628136, gene_1963 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|628136
Unique Namegene_1963
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:447445..452434 -

Link to JBrowse

Properties
Property NameValue
TranscriptId628222
ProteinId628136
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:447445..452434 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01760NO04G01760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628136mRNA_1963-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628136mRNA_1963Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|628136

>mRNA_1963-protein ID=mRNA_1963-protein|Name=jgi.p|Nanoce1779_2|628136|organism=Nannochloropsis oceanica|type=polypeptide|length=902bp
MEWTRSFFTSAAPTAPVPAASYAVDPPSPPPGPDDFPENPTELVATSKRL
RPDAKNVARRLVLRRELGRRLPAGLQETPQMLERLPMRHRVHGYVVALNK
ALDAYVAAKCSSVFSPSSITSVFAFPQSYTPDELAWQHVTKAVLDIRDCL
IPLDSSYATPPYDNDHDASQKRKSDREMFLRSDGPESLLRLFLPPVLVVK
DLEKLSIRKLYSMYGEVLNEAMAVVREMSYLDEGMGARVGSDEVIICFFQ
MLKFRCFFDGAVAVLEDLLADRGGGGGGRGREGGGGMFFLGLVPDVRRLM
MGFSLREMAHFCRILALLVFDAEERNLMVMEGGGGMMSSLGILEWRRDRV
LRPNPVLGRNQSVLLGCREVVARLVTIVRIMNFAPSLEVLSSRKRLRRAC
PMFEIFNLLGHRVEQRGWGEVERLEEVVLFVLSALLGGRRKKEFKALMLV
PREEEGRGSAEGGMGLIEALGVMWERMSWGKASHHYHTLGAMAMTMTMGE
DEEEEGLYAGGGEGQGQEEEEEVEEEDGEEGEEEEEEEGMPPAQAHLHGP
HCECTTDSALRVQFLRTLQNALEPDWEEDDDEILSPGLQVGGNMQMCFDL
LGELVKKNRRVLAMVEEEVREMGGKEGGREGWEKLAEVMLDRLVDSNVFV
RAVLLTVAGGEGGRIGGIDWKVRQVGVDGLEEEEEGKEEEEEFVQRVSSM
RVAEKAAGGGGGGGGSGGGGGGGGGGGGGGGRTGTGTEVEEEHVMIGEEE
RERMGHTSYLLQTWVRPTIVSVTRFLEQSKMRREQQQQQMGMQKIMTAFN
PPPSSNPPCPLFTSFLSQHHILLLKRLMGQVYYCPRGRDRYSLEFSTHLP
FAVWKEVVDRLCEDEAASMTALVHTPLVLPLSPYVQAPAYPVHSRVRSRK
L*
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Synonyms
Publications