jgi.p|Nanoce1779_2|578443, gene_1930 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|578443
Unique Namegene_1930
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:377664..380626 +

Link to JBrowse

Properties
Property NameValue
TranscriptId578529
ProteinId578443
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:377664..380626 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015969guanosine tetraphosphate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01430NO04G01430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578443mRNA_1930-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578443mRNA_1930Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|578443

>mRNA_1930-protein ID=mRNA_1930-protein|Name=jgi.p|Nanoce1779_2|578443|organism=Nannochloropsis oceanica|type=polypeptide|length=875bp
MGATQKTWPVRLLSVLCLLLVLLGSHRIDGWVGSHAGSLGRRQKHHVPRR
RRPPTQLLPPLPVQVLAWTSTSASRASSSSSSSSSSSSSSSSSSSASSPF
SSPSVDDEANPGVSGSRDDDTSTPTLTAVTIELTDWVSEGEELWQNAPSM
RRNKGNVKEPLPNSKTTKGAAQVRARETASSSLSDSITALGFMDSERDDS
KEVEHEQEQQLPVKLQREVNLVWYEIQQGGRMAYLPPEERARLKQQLVVL
AFFRTLFEHPGQVLNTQSAEDCFQQADVNRDGQLSFEEFLRWYTASHDKG
KSRSRSSSNSSSNGSISSSSRKSTGLVPFGQGAAAKSLEGVAMKDLLRQF
LVEKKQQRQGQQQLHFYEQDKAKSEEEVLDNLDRVIETTQLLLELEADAD
TVLAALATYFLGLDDNATAGGGAESARDRTEKLAVVNSQCGPIVHQIVQD
SARLGGLFQAPPEVTQFRRNPKEYQAMLDLDHHNAQLIREYLMAANSDAR
AFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKE
MEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGL
RQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGST
GATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEERKSSRGHLMP
AGALSSSSPPSSPSSSPPSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVD
NPKPNGYRSLHTGVYLMDGGGTAEIQIRTADMHMEAEEGVASHALYKAEL
QTTDQVEQFQQQLGGGRVTTTTTTSSSSTSSSSTSSTKPAEAKKEMKRTL
LLPAEVTSTPVALAVRVAKEEPQP*
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Synonyms
Publications