jgi.p|Nanoce1779_2|668634, gene_1853 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668634
Unique Namegene_1853
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:181445..185936 -

Link to JBrowse

Properties
Property NameValue
TranscriptId668720
ProteinId668634
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:181445..185936 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00730NO04G00730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668634mRNA_1853-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668634mRNA_1853Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668634

>mRNA_1853-protein ID=mRNA_1853-protein|Name=jgi.p|Nanoce1779_2|668634|organism=Nannochloropsis oceanica|type=polypeptide|length=1055bp
MDYESSRTSRQPSQHQRHHLHPQEDSLELGGRLPTINPGVTKPFTTRSSS
ATAPHSSSTTVSPATAPAPAATRDTCIRRFVNMLLEGTTMQFSLLCLDAL
VIAALLPELPALAASMTDAPKNVPLVVALIVGGLFLGRAGGGLWCHYRSQ
PSSNNTHHDGHYHQKPFSLKTVLVAALVYSVVWFVQGFVNRLSVFIIGQF
VIGFLIGKHSIFKNRAHPGTTLSSPSSSFPVLLGAMIGVLIGGFFDAQHT
LNPCPADEGIACTRWADGAPMAPPSGSARPPRRRWRRGRGGRKGGRGGGE
YRLLSGGGSGAIAATASRRMSEEEVMAVLQEAEEGGRGGGYVQTPHHHVH
LLRIPERYVKGCNGDMEEAARRWKDTLAWREEQGIDRILLEPQRNFALIK
ECYPHFLHRRDRGGRPVYYELLGQINLKKLKAQGVTLDEVVRYYIFLTEY
IWNKLQPEDDERGAMISVLDVENVGIMDLRGDALEFLKAASKVVQLHYVE
RSHKMFILNAPSWFNVLWKVIAPLLHENTRQKINILGKDHKAVLDVIDAS
CLPVRYGGTDDMALGEAPEEVDFRAYLDDVLRGKVGWEGGDEEEGGKTTT
AVVAAGCGSGGNNGGGGGGGGEGGGGLPTAAAAPTAAAAPPAAAPAPQPA
SSLWGARLVGVGQRVAGGMVGGFKALRPAFLTPLSDAQKANLGRENRFVY
DEGRRQWILIEEEPEEEEVDEEEEVEAEEEERLVRAIQAAHEVGGRSSSI
RGRLAAVLRGGGGKEGARNNADAVAAATAAQARNVEELEAGRKEEEEEEE
EEEEEEGGEEEEEGENKASAAAAIVEGEEVESIVEDREELARTRSGSILL
LLLVAWRALALSLLLVLPLWLADQHGSAPYEIALLLFCGGIVATALWALI
ERTHLLPPFPTCLATLASLAVACLLLGPLSSSSSRHPEAYREAAGRGLSV
VIAAFAVLMMGGSVSWAVLLSMALFGKEEKGARDDLLPSLLLADVLGAVL
GPVIYSASISYGGEGGGEATWVSVVGWVGVGSVLLVGGLGKSLPRPMMTT
EGGR*
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Synonyms
Publications