jgi.p|Nanoce1779_2|668628, gene_1845 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668628
Unique Namegene_1845
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:155198..164244 -

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Properties
Property NameValue
TranscriptId668714
ProteinId668628
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:155198..164244 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00640NO04G00640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668628mRNA_1845-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668628mRNA_1845Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668628

>mRNA_1845-protein ID=mRNA_1845-protein|Name=jgi.p|Nanoce1779_2|668628|organism=Nannochloropsis oceanica|type=polypeptide|length=1504bp
MVKITDDGLVLTLDSDDDQVFMITRLGKVVDEADEEEDEQEDDKKDTLES
TDVTDVNAIIIDGGNKKKRKQLKKKMKKQEAEAKRKKAAEMDPTFAFEEA
DDGYGNKTSWDFRETLVKLGLDVAREGGKEEGGAEEKKAKAKAEEVDKEE
DEEGDEENGMEVDDGLDADAVKDLNTEEALVKAARRKQRLEEKEEKTAHK
KQQQLEKKKKEAANFGEAAGLQPPNDTDNDPKALEFFQELSDDLRIKSSA
PGRAVLFNQLNLSRPLLRAIEVLGYITPTPVQTAVIPVVLAGKDVCASAV
TGSGKTAAFGLPILERLLFRPKRLAATRVLIISPTRELAVQTHVMLTKLS
QFTDMVCCLVVGGAKNMRAQEAELRARPDIVVCTPGRMLDHLMNTQSVAF
DDLEILVMDEVDQLVDLGFAAEVEQLVKECPRQRQTLLFSATMTAKVDAL
AQLALNKPVRVRVDTSFEVAPRLDQEFVRVRGGGSDEHRHAILLALVTRT
FKQRTLVFCNTKVDAHRVRLIFELSGVKAVELHGNLRQCERLESLSKFKE
GEAEVLVATDLAARGLDITGIQTVINAEMPRTRATYVHRVGRTARAGCGG
RAVSLVPDSLRLFMKQIVQDVEDKSTVKSRVVPPPVLAHYEAKVSGFQAA
IEARLKEEEAERQARWAQMEVERAQNCVEHREEIMQRPARQWFQSEAQKE
AVRVMAAEAGKAAAQGNGGGKLSAYATYNPSVASMELTKKEKRALEEEAK
NKKPHRLNRAKRRRMEMMKEEDEERKEMAEKEQQEREAEVGVEDDEGSSD
KKKKKKKDKPATMISQKSVAREAKRAAQPGRVRGEVKAAGAVRVKPARAN
GSAGTYQLSSGFDKDIDTMYQKKGKAGEEGEGGKKGGKGDVGGRESAYKF
RGLSAAVAGGAGNGLRKGGKPSHHAFKSKNGFPRRLPYRLIKTVPTSHPS
APSAPSLSLGKMDDKPSVATASGLSPPSNRGGAASEDSNTSSPSTARQNG
GGGSHPSSSSTSTSSGSSSNHPSSPGGTPVDKAPLVYRSSSGEAASSATG
APGGPRRKRPETAMKKFYNTVKKFTYAFVVAALAIFSYMPFAFQVILGSF
GLFIVGLIYLPPPVKHRWEVKFMVAQGWTLRQWFSYLSRHNFAIDPIYWH
RALFITVISTFTSFVWEPKEEKEYPEATIRATTIQQPPIFILGHFRSGTT
RLHELMSKDERLVAPTVYQCFAPRVFLHREEAISEQFGKLQIRRPMDSVK
VRMESPQEDEFGLVNLCGLSPYMGAIFARAERARNRYIQFLSFKEATAEE
VGQWKDAVVYFYKKVLFKKQEKRLILKSPAHTARLKLLHELFPEAKFIHI
SRNPFEVYQSTSKLFMDLLIQWNLQYVDYQGDVRAHPDDDELHRSVLTLF
GGMYDSFFQDLDELKLGKDMLTYVKYEDLIRSPVGVLEKIYKDLDIGEFD
KVHPRLVEATANDAAFRKNAHPNISADVKKDVRERLSRYFTEFGYEKEYG
QTL*
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Synonyms
Publications