jgi.p|Nanoce1779_2|512248, gene_1843 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|512248
Unique Namegene_1843
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:153337..153942 -

Link to JBrowse

Properties
Property NameValue
TranscriptId512334
ProteinId512248
Product nameN-terminal region of Chorein, a TM vesicle-mediated sorter-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:153337..153942 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00620NO04G00620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|512248mRNA_1843-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|512248mRNA_1843Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|512248

>mRNA_1843-protein ID=mRNA_1843-protein|Name=jgi.p|Nanoce1779_2|512248|organism=Nannochloropsis oceanica|type=polypeptide|length=202bp
MARQLLLNTLTSVFGDLVEGLTEENLKVGVWSGEILLKNLRLNSKAVQKL
NLPIDVQHGYIGSFRVSIPWSRLTSESVSVEIEDVVLIAKPADPMKWDPE
ELRRCNLNAKRILLEKATEAARAWNSNRRKSQADEAALSASGSGKDSAGY
FAKLATRIADNLFVFLKNVHVRFEDPFSDPTNCVSAGIIVQEFQVQSTNN
QW
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Synonyms
Publications