jgi.p|Nanoce1779_2|668594, gene_1800 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668594
Unique Namegene_1800
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:20342..32727 +

Link to JBrowse

Properties
Property NameValue
TranscriptId668680
ProteinId668594
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:20342..32727 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016887ATPase activity
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00230NO04G00230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668594mRNA_1800-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668594mRNA_1800Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668594

>mRNA_1800-protein ID=mRNA_1800-protein|Name=jgi.p|Nanoce1779_2|668594|organism=Nannochloropsis oceanica|type=polypeptide|length=2296bp
MDTSSKAHASPFWRACQHFLRTLESSTSSPSASAYWRAAMTRALQPGGGQ
ETTRSATMAAEALGELLLRDDQASPRIETLFRPVLLDLVAWLVSTFHHDT
AASADQEAAASDKATHVLSLPLPLVLPAVPLPLSSLPAAAAAAVLLARSS
SPARGLRENEANGCASRTLTGAPVEVLAALSPLLETGQLTLPGRATPIQA
HANFRLFGTVTTSDSSSLKPLLGGLAALAGPWVYVRTGGKEKEGGEAYIT
EAQRLEVLSHLLDVVGGGEGGTEGGEGSIAYGVLTRLWNVRVERLEEACL
RHRPGLGPRGGDRETGCGKTTMIQALARETGQTLVVQNLSLQSDGADLVG
GFRPVELAQAARRLYTELLPAFEALFSRKKNARFLDALAMAVQGQKWKRL
AEGMKRALASAEEKLKKEEMEGEEGEKEGGGEGENLRARWANLAVAVHRF
DRRVSASSSSSSSSSSMMMAFEFVEGLLVKAVREGHWVLLDEINLASAEV
LQRLTPLLDHEGGREGGSEGGGGGGGSLVLTEKGDVAPVPRHPNFRLFAA
MNPANDAGKKELPPSLRARFTEVEVSELTDPQDLRAVVRQAWGEGGEGGG
GGIDPSDLVKLYLRCRTLAETVLVDGAGQRPRYSLRTLTRALAAARALTA
APQHFPPLRALLEGFALAFETQLQEACRPVLHRELLAALSSSILSSSSAT
SHRALPGLSDKELEQPSRRHPSSSSSSSSSWELVSGPFWLPSGPLPLRDW
SKEEGGGGRGTKRFVPTPSAQLALRALARAVAGGQGAPILLQGPTSAGKT
TLVEYLAGRTGHVCVRINNHEHTDVSEYTGSYGTDPETGQLKYRDGLLVK
ALREGAWLILDELNLAPPEVLEGTHPEGRMVAGNPCLGRFGTGFLEIDLG
AIPTPEMEQILHERIGMAPSHCRMLVGVMAALQGKRTRSGVFAGREGFVT
PRDLLRWASRKPSNRQEIAEEGFMLLGERLRREEEKEEVRLVLEAACKVT
LDPATLYLPSSQSSLAFSSSSSSSSFTADPAAIGAWLAPYVEGVGEEASE
GRREEVVRQAMTGMAMTPSLARLLKLVGRCVAHEEPVLLVGETGAGKTAV
CEVFARLRQSPLHAVGCHANTETADLLGSLRPLRGRGVIREDIKGKMKKM
VEVLREGGNEGQDMVLPVLPDPEKPRAVQAWLEAVLAVAAKRQEREDEGM
EEGMEDGAEEGEGPEDNQPQTPTAISTTIPSSTSSPSSTSSSRTRKRKRA
ISNAATHGLPFSSPPLPSPSSLPSSSHAASLALLSSLGHAAIALSQKLSS
TLFEWVDGPLVTAMKEGHVILLDEISLAEDAVLERLNSVLEPGRSLTLAE
KGGGKEGGEESGEDGSHLVAAPGFRLLATMNPGGDYGKRELSPALRSRFT
EIWVPPLRAREDVSAVVLSVLSPPSLPPSLGLASLANPMLDFVDWLRKGE
GRGAGMMGGGALAAPAISLRDLLTWAGFVVSMTTTSAAVLPAAAAATATL
ERQEEAAATMPTTRTRKGRRKNNIGSSDSSISMPNASSSNKKNEGYQPAI
MSLPEAFVHGAELVFLDGLGLGASSSTSSSSIDAFRSRARQHLLTLLPSP
SHHAAALQAWASLARDFPPSLHISNPHTFGMNCFLIPRGPLPHIDPHFVL
NAPTTASNLLRVLRALQMPRPILLEGSPGVGKSTLVEALARASGYALTRI
NLSEQTDLSDLLGADLPVASSSSSSGTEGEEREDEEKHLVVEEEGEDSGP
AFAWQDGPLLAALQEGKWVLLDELNLATQAVLEGLNSLLDHRHEVYLPEL
GRSFPCAPGFRVFAAQNPLGQGGGRKGLPQSFLNRFTKVVVDPLREEDLR
LISAAKTREGEEKGEEDEMEVVRQDEEEKGRKEGLVRAMVAFNQRVSEEV
VGRGLYGRKGGPWEFNLRDIFRWTELAETERGVDLRKEGEKAYAHVLGTM
ETIYAARMRDSKDRMSMRQTLREVMAWPCLLVSAGGGDGSSSSSSQLPNS
SAQMVRALAKLLGGREGGRKGGVVLEELPLTPATDVSELLGSFEQKDQSQ
EWEAWRRRVASLRMGVTRTLLLALAKAAMEGAEGGMYLAAIVEALSGLES
AVWAATTATGSATAGRSSGGSSTSVMEEVEKTQRSLLMALERAIAALPST
TSSSSSSFCSELRHLQQHIPPFPSLSPSYSSSSSLKQIKGRFVWVDGPLV
NALERGHWLLLSNANLCPASVLDRLNALLEPNGSLLLSEAGTNSSPSNPS
SLPPSPRVLRPHPNFRLFLSMDPAVGEVSRAMRNRCVEGSSDGGR*
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Synonyms
Publications