jgi.p|Nanoce1779_2|549685, gene_1763 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|549685
Unique Namegene_1763
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1449705..1453487 -

Link to JBrowse

Properties
Property NameValue
TranscriptId549771
ProteinId549685
Product nameClpP/crotonase-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1449705..1453487 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008236serine-type peptidase activity
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05510NO03G05510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549685mRNA_1763-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549685mRNA_1763Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|549685

>mRNA_1763-protein ID=mRNA_1763-protein|Name=jgi.p|Nanoce1779_2|549685|organism=Nannochloropsis oceanica|type=polypeptide|length=557bp
MVGKLSTTRGQPNHRFAMTSCLALASLLSLAFVLLPPQVVNAFSTTQTVN
FLRIKSCTLSTPRFVSRHAGSWSRKGTASRTVTMEQSGLHGEVNQQPSHS
RVWALETLHRFSKLAPTFLSLLLGVRPLFALAPPGYAAAEAATTTTTTTT
DTSPASSVTVPTFSEDQAASDSDDLFDEVWKLTSKFYLDRSFGGSDWGKA
RVDLRAQSNLPGDSASETKATKKLLKKLGDKYTQLLSPYMYTEMSRFDPI
GAGFMLSIDDDGYFCVSSDPREGSVAAAQNVQKGDKILEIEGVAIKGKSV
FDAVDLITKEDKADVRLTIQSKLHPGTAPRLLVLPRDFNAVSNPVTKAQL
TLTEDGRKVGYLKLREFNSLAKEKVREALSSLEEQGAEAYIVDLRGNPGG
SVQAAVSVASLFLPEDKIVTFIQDATGNRLPLKTQGATALPPSDPIVVWT
DRKSASASEILASALHDNCRAVLMGQRTFGKGLVQGVFGLTDGKGLVMTV
AKYETPRGASIQGTGILPDIEAVIPSNILGDQDVSVVRKEDFGLKDGMCV
EAMASK*
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Synonyms
Publications