jgi.p|Nanoce1779_2|667621, gene_1757 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667621
Unique Namegene_1757
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1413831..1430019 -

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Properties
Property NameValue
TranscriptId667707
ProteinId667621
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1413831..1430019 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05420NO03G05420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667621mRNA_1757-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667621mRNA_1757Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667621

>mRNA_1757-protein ID=mRNA_1757-protein|Name=jgi.p|Nanoce1779_2|667621|organism=Nannochloropsis oceanica|type=polypeptide|length=2193bp
MNVGFLCRRCGRFVSCGLKGISKGYFYFAKACLDDSDLRRLLLWSLPSMS
AATLSTQPAPPRRLCMDKKKYSKMDFFCPCTPRSIFSLLVQPPSLHHYRH
PPPSQPHPTIPPPSMDQKRRKRKARLHSSGSSGSSGSSDSSDSSNSSSGL
SAVVPSHRAKDGMSDSEKEIAVAAPGAKDSEEAASGDGGSNSVGGEEMRA
PTTSAAQPKPPTLKDSDDDDDDDDSGDDEEEERGSSGGGGGGSDKADAKS
DGEGDDEDEEDEDDEGNSASGSGGEAGSDSDADNEDESDSDDGDSRRRKK
NEGGRTRLTKKKKRSRTEGKVKRKRRGGFLKPSMVDDEAAESGGEEEEEE
GGGGREAEEGQTAESEEGEEDENEYVHDDFVVPDEVAAEEERAGGQGSTA
RVGQLEREKKRRRIKRTDVEEVKGELEELVDEDRFDEEEEAKARRAEGMA
RQRQRGPIDEEDYESDDSWLVRDYEDDDMARRRKARSGARDDALANVDQD
LLEDLMAVFPEEDDEEEGEEEEEEEGEEGEGRRRRAHAEKEGEREGGRMA
RMEPALVKEHFLTAEDERIRKEDVPERLQGGGVGVRRGTRVLDEIEREEE
AEWIVEQLRLPYQGDRTKQRDAVKKALEFLQVSLYEVPFIWANRRDYLTP
HLPDRSYLWQITRLDAKWEELQRRKAFALARLERFFSAGHYGYASRKDDD
QAAREAALQDVEARLRDAESGLEEWKNKVQALQEREDARLLGADDEEEDE
FAEESASLPQAKRTLVEFQQQQTTALADLSALEAEMEAAAAEKEKREASA
TPQWEEEGGEEGGEGEELERLCPDAYRTVLDTTREEDMVRDLQNYLGLIG
QESSRRAQRMAFDLYRKCRSLKGLRRFVRLFVCPAPELGAALHTSSSSGG
DLEEHLRPLIPTPGVYPENAAAEYTTPTLTKYEEVLRAAKHMVAMELAHE
PRLRGCLRQTYRAEATLSTQPTLKGRSEITDEFHKLHGLQFIDKKPLYDL
LEPTRDSQADLFLRILQAEKDGFITYTIDAPATSWTSNGHGSSAWPALLQ
TLQGLYTPFRTASLDASLVDAWNEQRKEILSTALHSHLLPELEAEVKREM
RKKAEEAVVSMAADALREVVNTGTYLPKCRNINCTLIPPYEDFQLRPSQK
FPFELTPLSSSSLDVVAVLQAPSRSEPSFAVSVGRDGAVRDFVMLPPLQS
GYDGDAAQRDKLQKLLIEAKPAVVVVNTFVGGHEAVRLKDRLVKVVENVA
RLYQHGELAAQDEEGWEPCDVLLIGDHLANVYARSPRVKKEFPDYHHHLR
AAVGMARQMQDPLAMVTLIYAAQDPRGGRFGGPGYQLSYLPLHELQDQVN
PHELSRRWEEVLVDAVNDVGVDLNKSVSTLHLAGLLPFVAGMGFRKANSL
RAAVRNSHGGLIVSRAQLLEEELLTPKVYENAAGFLRIRVPHLLGEDGRL
LEEDDAMDLYDEEEGGRRGGRKRKGRRGGRGERKVNLLDNTRIHPECYLA
HEWVGKVCRDAMELADAAMGSNELVQMVMQDSFSRLLSTLCPPSDHGRPL
ERLLTTEVQDDLASLNLEEFAIHLEQNTGNGKRFQQMDQIKEELRFPFRD
PRPPFRGLSDEKLFELLSGETDATLRAGLRVTGRVFKVDDNAARVRLDQV
VVVGYLHRSRYPGMQRDMEFPSLVPVDTPVEAVVTEVGREGGREGGKDDP
AEYEIEKARVSLRLSCLPEDISSREWARPPALPPLDRYFDEEKALREYEE
RRRKIEEKVRLAKEGKLRTSRRQRKVDDERWRAINHIQAEQYLKEQGKVG
EWLFRPSGSGALSLSWLFLEDTVLHIPIKEEEKEAGDAVGKKLTVQGKVY
QELDQIVAQYIQPMNDLVDSVASHRKFRRKPKEEVESELRAWKKQQPNQV
FYLYYPDPRRQGTFKMAHIVKHQIFGEPVDVTPRGLKYRNKMFRSCDEVS
DYFKEHFREALPPAPLERPLPPLLLDCPHTLNVLLVLPLASLLTHQAQVL
LLGHRPCRCSSSSSSSRCFCSSSIYSSNSSSSSSSSSQRRHRFVVRDGKS
WPLKESIVKALTIAQSIPSMVGALVLGRYVAVASATRPLTLLAFPAYYTR
SLTADVHQNPAQDPDEAHQERKSAEMERRMQALKRFGLPKAMDDKVMLPQ
GKPVEAGGKKEHGKEEETQDWNAIYGDYIWYRDNQTTKGWKS*
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Synonyms
Publications