jgi.p|Nanoce1779_2|573279, gene_1740 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|573279
Unique Namegene_1740
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1370565..1374232 +

Link to JBrowse

Properties
Property NameValue
TranscriptId573365
ProteinId573279
Product namepyruvate kinase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1370565..1374232 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000287magnesium ion binding
GO:0004743pyruvate kinase activity
GO:0030955potassium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05260NO03G05260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573279mRNA_1740-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573279mRNA_1740Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|573279

>mRNA_1740-protein ID=mRNA_1740-protein|Name=jgi.p|Nanoce1779_2|573279|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp
MLLLRRTASRRCLLQSSSTRLLAPSPVAVSQRQKVDYIPSFIESRKSLTK
IIATIGPASEQFPELQACVKSGMRIMRLNFSHATYEEATLRINNLRKSHG
VHSAAMGSTFNLRAVLLDIQGPKIRTGSFKEGSIMLEQGKEYILTTDESV
KLTGDEKQFYVDYEPLYGSTKKGDPVLIDDGNVVLEVTGHVGDGHGVICK
ALNSGKIKNRRGVNVPNSKVDLPALTVKDQADLSFGVQNDIDFVAASFVR
KAQDIHDIRAYLAQEMSKHWPATHLPPKIIAKIESTEAIQNYEEIMEAAD
GIMVARGDLGVEIDQADVTNMQKMMVRRCRSVGKPVIVATQMLESMQVNP
RPTRAEVSDVTNAVYDGADCVMLSGESAQGKYPIESIATMRTIIDAAETW
IDRNPVHQGKLILRNIEKHEALTNQPVSFYEAAASAAVQAAFRLKAKVII
VHTKDGSLAKTVAKYSPFVPCMCFTNSQKVAKQLIIHRGLHPIVIPDGHL
WNTNKDVVLDHVKRLGFAGQGDRVVVLTGELQHEGSTSTSGTYYMDVK*
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Synonyms
Publications