jgi.p|Nanoce1779_2|15965, gene_1731 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|15965
Unique Namegene_1731
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1346683..1352499 +

Link to JBrowse

Properties
Property NameValue
TranscriptId16051
ProteinId15965
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1346683..1352499 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|15965mRNA_1731-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|15965mRNA_1731Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|15965

>mRNA_1731-protein ID=mRNA_1731-protein|Name=jgi.p|Nanoce1779_2|15965|organism=Nannochloropsis oceanica|type=polypeptide|length=1520bp
MLALGDEERNKLTKQELRALPQQLQDLLTAIGIPRSATILAIDIFRLSLA
CALFKTKQLEKRLFGLNYIRDVIAKSTNSTETSSSLPPSRPASVSSFSSS
FSSSSITSSQQHSRPGSLSLSHGTMALPPILPPSLLVQILTNANIVEELL
GASMHIELLTRSPSLLRFLALHHALLPSPHLDSLWHSSLGKHEAVVCVLH
TLLVDLLPFLPSALRRYLFDQMATLPFRKWEAETVELMYVFTKEALKAAR
PGLPATNKEDGEGEGRKEDEGEEAERKTAKVAGGRWRGGGGGWKGSNSSS
SNSNIRDKMGQKILAPASNGHGNGLFDGLFGFGLLYKYLLDDKEVREAST
FPPSLTSLAITHLVKLMREEEECGRERETVLCKCVANVRAHQSVPASLLL
LARTVGTYPLSTAPVVAGAVGGGGGGRGGGMTMREVIDLVLEKQQGVWAS
LVFEELSWFQREVRRLYGPGLRYGHPSTEAFNRKKIRLAHARSRYTYQEH
VQIRLNFILFLLAAAASSSPSSLPSSSSLRLEARQLNAVWSTLVWVGEGG
TEGRRDGGALTKGGADVAFDWLVRMTAKPPSVGKVLEGMEWGMEGGMEGG
QVPLVGDGEGAAAAAAAGGRGRGQGGGGGGGGGGGGGGNGGLLSTAYSFL
TGGAAAVTAAPLSSLPPLHPLPPPPPSPPPHTTPYSTAAVLAGEAPVIDE
ASSLLSKALLRDLFEKKLKTLPMSRWRPSTARLFLHLFLYFNLQSKSIKR
QHLPASSLRSTTCCWVRAGPSLEGLDILWEMMFDASHNEVSHVASSLLIE
LHHRIATPSSSSSSPSSFSHSKTEGYRGALVERCLERIQLSLPLLLAWQE
KDEGKQDGREEEVRVDIKAEARRITRAIQLLGRLIRRCKRDNANSPSSLP
ASLPASSSSFSSSAPNTPTTGGGMESVSSSSSAAAAAVDITVHTGQSEAT
CVALRGLQGGSRVGDIRKQVAAHMKEAPENILLYVQRRDEEGKEGGREGG
RGFAPLGAHDRLDCDGATLEDEGLTLLLPSLRPVCLFARRHGLSTDPSSS
PLSPSAPPSLPPVRIHAFDLLTPPQLEESSAGSISNVILSQETWLWQGGE
EGAKEGGLPPPPLPHKVDAVFGGSSSASTAGAAAAAAAAVEVPLAGHFKS
HPEQLNQLLTLLELDSDVQSRLRPILGDLRVAAWALLQDLPTHPSVLADI
LSLRFFDPPRWAAMLHEGAIYKLLYALQVLDALLTRPPSLSGEVERVLEW
QLRFVNGGYLKDLVMALQHIWFLSRSLPAREGGREGGQEGGGGGACFTFP
ASTDVLLSLESKEEKEEENKDKKIAKVGKDGAPPPPPPPSSSISADVIAL
GLALLARILHSFLRPPPSLPPSSSSSSSSSSTTATISSRAKGNQPLLHLT
LGIAKTSAPLIATAATVQHSMDVALALAKAQRKAHPTHFLTAVTHTVTPP
PPSLYSPPCCLHTLPSSSGCWPSRLKFPLLRCVRPLHGGSSGYAWRRCGL
PGRGRAPGRGWRCCRCFCK*
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Synonyms
Publications