jgi.p|Nanoce1779_2|12884, gene_1644 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|12884
Unique Namegene_1644
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1142221..1145840 +

Link to JBrowse

Properties
Property NameValue
TranscriptId12970
ProteinId12884
Product nameAcyl transferase/acyl hydrolase/lysophospholipase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1142221..1145840 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004622lysophospholipase activity
GO:0004620phospholipase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009395phospholipid catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04420NO03G04420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|12884mRNA_1644-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|12884mRNA_1644Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|12884

>mRNA_1644-protein ID=mRNA_1644-protein|Name=jgi.p|Nanoce1779_2|12884|organism=Nannochloropsis oceanica|type=polypeptide|length=1052bp
MGLLNPFLASVTHVRARVPLLLVLAMISSSLAACPGSPFTFHFRVRANKG
QSRNAADKAVANVEDFFSTTQLTSTLFVTSTTMLQDLCDSSIETLSVSTK
SASDAVMRAMGNEDRSNGISSKGRGKPRLFVVVAVSGTPGLSAIDTNQVS
NSLRTLLAENGIRATVTASVQRGPATISNLRLGANAARIVGVKIPARTHT
FQEYVALPTFKAYTPVIVADADFRGDISQDIVALSNGVALEERCSVTNVY
RSPRRADDWTLLSRAEARMFIIRSSQAGRTVRLRLNMRRSKYYWRLRGNK
NLSKNSKSLGAMQAFWSGIGVKLVGKDTDSIVSNSRLLRNNNQRELDGIS
LNSTKGLNDEELSFHTDNYAAADYSQEYAIVFKCGSSSAPLRMDLAVVPR
VRRSNGVSRRQAPATSMTCLPGSTAQGLSRINSAVPLLSASSADCPVFPK
RSSSASRVLDNATFDELHPEEKEWVAQRLLKTGPKLASFIEQNLFALDPS
ARTDLKVAIAVSGGGKRSLFNAAGVTSNLEQAGVLDLATWMAGSSGGSWL
LGGVYGASLGKEGLIDPATFISARMPDLTKAVFDGTFRANDILTNFGING
GVSLPVAPFAFQDSAATTTANILCQSELKFQSPATKASQAGSPALSEYWG
RALAYQMLGAPFQDGGMGLTMSGLLLDGLVGNHNAPLPLMLLQNAQGSAF
RFWEVSPFDVGVHKGEVHVSYPTALLGTDAEDPNKRCTTQIDQVSWLMGV
SGWIFPLAQEYRGGTLQSVVCGEAGSACQPVLINNPFVGHGGPSSEAAAA
EGMPDLFTSAETKVLDGAATYNNPVWPFVTPTRQADVVIVIDSSGSKGGK
TFDAPISTGPEASCATDSAPGASASCASNLYYEADGGLNNKCCSTCEPLL
DNACWPTADPVLNDLFRLSELSEEHTLPADIPKPGFTNPRHTTQVSFFGC
REPNVTAIVYVPNRVVSSGKSGFTALRSALGLNQIFGIPADPLQAADVDD
IVRNGQDQLKASDFRKCLACLFAASLSEQDRMGFWATTSQCTSCLEAYCQ
G*
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Synonyms
Publications