jgi.p|Nanoce1779_2|572916, gene_1627 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|572916
Unique Namegene_1627
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1103672..1109260 -

Link to JBrowse

Properties
Property NameValue
TranscriptId573002
ProteinId572916
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1103672..1109260 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003774motor activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04280NO03G04280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572916mRNA_1627-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572916mRNA_1627Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|572916

>mRNA_1627-protein ID=mRNA_1627-protein|Name=jgi.p|Nanoce1779_2|572916|organism=Nannochloropsis oceanica|type=polypeptide|length=1695bp
MLQGLPAETLAELRLTDSAEDYRMLAQGGCWALDDVDDREEFEHVAEALA
TLGVNEEERAALWRLLAILLHLGNLEFGDEGEEGAEHVQLSSPHVALSEI
AELLGVTPDKLVQGVTRRTTHTQGSTLTIPLNVDQTRNNVQAVIKYVYGE
AFHWILRKINSCHATMASSSSSTTKPTAAAASAGSMASFIGILDIFGFEI
MTRNSFEQLCINFANEVLQQQFNMHVFVLEQQEYVAEELDWSVISFRDNQ
PVIDLISKKPLGLLIMLEEQGLLGRKANNDALLTSYHNTHLGKVECYAKP
RFHSDEFIVKHFAGQVTYSTAGFIEKNNDSLHDDLLDLWRLSDDAFFRNL
LTDKPTPDSPGYIPPLPTPNKTAVKPQVDLDGRSINPPSSTSSSSSSITS
SSDPNKRGRALVGGKLNVASPGPGAISGVFTVSCTFRRQLEELTATLKAT
EPHYIKCIKPNAIKAAGGFSPRLVVQQLRYSGVLEVVRIRREAYPTRILF
EDFYRRFDVLLGSCKPASLRTATDYRAACQAIVTKVLPVGGFQLGKRKIF
LRDNGLDLLRDAIRDFYASHAARIQALIRGFLGVRRYLHTRCALLLLQRS
VRMHLLRKKFLRHRQQIVQIQAIWRGHRQLLAYKRELRGAMAAQKCTRRW
LAMRLYSSKARQAKQQREEAATICSAVVRGYLARCVYRRERAATRLNAIG
RGFLARKQYRALLASVIVVAFLRGNLARKRFQQARAAVLKLQSVVRMRMA
VRELGEHKAARRIQTMARAWAARKTFCTLRTQARLQREKEERSAALTIQG
QYKAYQTRTKFLAWRRAAIVLQAQARCTLACRLKRRSLAAIVLFQAHVRR
CRCQQAYHRIRATIRIQTLARRYSARKIFIRLRAAVRLQAWARGRAARHK
YVEYQSAVKIQAMARGHAQRRRYCRARGVIKLQSLIRGVRARRAYQQVRT
SVLLLQRVVRRFLDVILEERRVHKLHLAAGAGKVSTVHRMLDERPWLAIR
RDRKAHFRTLIHSAALAEDISVMALLKPRYEDLIATDGQGDTPLHLAAGK
GSLDLAKKFAAVCDGLDRRAWQDASSSNCAGVPNYRRKIGGGGAGEGTGE
MPRASFRIASVGIDSWDDRRRSARAQQALAVPARTAAGTAPGSPQRPGVS
MGIGRGSMAASSVSNSPARSLAHTPSHRQQKVQEVAEVGGSNKHIGSFGA
AAARTSVPSRRGGFEGLSPEELQLACDRAKCEGQVARVVQSNRLKAGWLK
KRRETDRFNRRWCVLTDTELRYYHAPADCPVSKVIKLKPSMLKVCDHIDF
AFEIHSPLLLDRRNREGRLYFQAENEMDLQGWLAKLRMVMGQTTHMYGRR
AHPIQHVNLEQREVMVACMNEAGQTPLHALVRSVEGREGKRSGGGQPQMV
QLAMWLIDNGADVNAQDLDGNTTAHLAALAAVGGSGRGGGVVRQQRTSRK
GGGMREDLEAMGGGMSPETNETLFRLIGALAQKGANLTLRNKGNQTVVDL
MAQSRQGGGAKLTGPGQTKMSADRALFPSPSRLPGCSYVSFFVERLAMAE
MNSEKMTAPFFKINVYSSKQQQVERTQVMTYPALQRGRSMWWGWTWHMQT
PVEHLSPGSFAVLELVDRAKGPKAWALLHVDDSHVDSGSQTLEMYRYPLD
LKLQRLEPADFFLTGDMWVTRATAVGEKEGSRAPRMSPLKIQAA*
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Synonyms
Publications