jgi.p|Nanoce1779_2|657565, gene_162 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|657565
Unique Namegene_162
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:410875..413648 +

Link to JBrowse

Properties
Property NameValue
TranscriptId657651
ProteinId657565
Product nameOrigin recognition complex (ORC) subunit 5 C-terminus-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:410875..413648 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01820NO01G01820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|657565mRNA_162-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|657565mRNA_162Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|657565

>mRNA_162-protein ID=mRNA_162-protein|Name=jgi.p|Nanoce1779_2|657565|organism=Nannochloropsis oceanica|type=polypeptide|length=842bp
MFAFMTGNGKKRSRGSGSSGSGGWFGGGEDSSGGKVNVQTSSLASAGAAS
GTNAGNNKRHLSEIERRRQDSIRENQEFIKQLGLTDVLTGMREEQAPAAA
RAASAPSLVDGDAGRQARGGPFSISAAPTPTLEQVKAKWVGREAQIKLLA
RLLPSVEEPCSSSSVLLVHGPSGGGKTGVVADVLRSCKLPHALIRGVEHP
TARSLYSTIAATWLRHVEMQAQALGLEGVGYMEVDEFDDDRQREYRVLAR
RERREARQRQRQLRKQGKGRMEEEEVEGGEDEGGTSGGSEGYEDDEEEDE
EEEDDDDEDPYYAQRSSVQQVSAGVGAATGSHLIPLPNRCATAAGLLHLL
RSWRGTQQQQPQQQQSARKEGSVDLYSTFAGGGGGGGGGGAAATGTVPFI
IVLDSADRLPRGASFARHELAELPAMLAGPQGKDRHNPGHGGAGAVVALT
VILISETPVVVPGSLEAALALNVPFPAYTKVQATAILLRSLRVAAGLPPS
PEAMEGGREEGEEEREFESLVAGFVNVLVASLYSSTRDVREMRRMAVLLS
EKYLEPVLAKGGREEEEEKGKENQAERRSISSGGGREGGKLPGHLALFDR
VRPLIQRAVHSCLHMPAEPLEKSNSLPPLPPSLSSSSSSSSSPFSPTISN
GVQKSSSSFIPQQPHQQEHQHQALLRYELPKMALYLLLASFLASHVSPNT
DLQLFAVKSSSSSSSSTTTRGTKRNKRTATAEDRAAEAQEAETEKDGART
FSLERLLSIFTCLVALTRASGASYANNTGTTELFAQINTLVRHRLLLRVR
GGSGELGGMKFKCNVDEGLVRVVATDLEVALGHYLERGARG*
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Synonyms
Publications