jgi.p|Nanoce1779_2|549299, gene_1515 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|549299
Unique Namegene_1515
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:821340..824370 +

Link to JBrowse

Properties
Property NameValue
TranscriptId549385
ProteinId549299
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:821340..824370 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G03210NO03G03210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549299mRNA_1515-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549299mRNA_1515Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|549299

>mRNA_1515-protein ID=mRNA_1515-protein|Name=jgi.p|Nanoce1779_2|549299|organism=Nannochloropsis oceanica|type=polypeptide|length=508bp
MEEEDEEAVLSVMPNAFSSSSTLGGPKAKKARQQLTLVIQPPLPRFPFLN
NFFDVHVFLFDESNQVKNGEEFEFPLQARPVFGDKARTPVEKPVMEVDPC
SPRLGRNGKASFRVRFTDVSMNFDNRDFRLEVSVFYVAPVVSDRMTVVRH
RLRIRSETQPPTVWYKDEGGRDKCIEVMVDLVDSEGRRVHGQEVPLKVAL
LYEDLQCVGKQDILKLSSESRQAIDHTGTATLRLRIEDVSKNHQSKGFVI
QVGPDVQHAPLNSDISPDTSTSVSVRSKRNRRSKHGRGVGGRVGMSSIGG
GVPHIAGADAAAAVAAAAGGPNLIKALSNVISWTRTVVNGLYQLQWQLIG
YESKADGSPDTNKPLFQISNPNAIVASILQSYRGETMEQLRLLVQALEPK
GGEERGAGGRGGGEVYGGSGSVYGEGRQRGAGGGGGCYGGAAVVGEAVIA
GDGHLSRWTDAPSYVARTQWVSRWRRSSLSRRGTRTRRRGRGFWRGRLSA
IGEGIDV*
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Synonyms
Publications