jgi.p|Nanoce1779_2|521883, gene_1461 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|521883
Unique Namegene_1461
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:602077..605460 +

Link to JBrowse

Properties
Property NameValue
TranscriptId521969
ProteinId521883
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:602077..605460 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005643nuclear pore
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL001ncniL001Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02710NO03G02710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|521883mRNA_1461-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|521883mRNA_1461Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|521883

>mRNA_1461-protein ID=mRNA_1461-protein|Name=jgi.p|Nanoce1779_2|521883|organism=Nannochloropsis oceanica|type=polypeptide|length=1091bp
MLAQLQNPTNLEALLLQLTAPDTQVIQQAEAVVKKYVKNPICVAGLVQQM
QGSKYIQVRQLAAMLLRRRLGPLWSKLDAKTKEALKVALLEAVTGEQERA
IRKNMASVIAVAARKLLSKNKWNELLAFIYQYSQAELEDHRELAFVILNE
LAETLGKSFESQFPSLKQVYQVALQDKSRKVQVASLKACAALLMHLITEN
ASIVFQDLVPGMLAVAKGCLDAGEEDIVSQVLDVFSELATTSTSVITPSI
PHVVHFCLEVLKRGEALQSSTQDVAGMVIIAIAEEKPKSLGKKGLVPDVV
ATLLHMMAISQDNAAGELLSTFDGRDAEEEDEDDDYEGPSGQDIAQRCLD
AMAIHVPAKYFYQPTMALIGQCLDSPDFNARKAGTAALAVIIEGCSEEVT
KHLGSILPRVFASARDPATCVRECACFVLGQLSENCQPEILECHGEILPT
IFTLLEDATLSVQLTGCHVLETFCEHLDKAVIAPYLQPLLARLHHLLQAP
KTSVQEAAIGAIAATAVGAEDGFAPYLHEIAPLIAQILPVTDERLLRMKG
RAMDCMGRMANAVGQAAFAPYLEVSMQTAVQCFALESLSAKEDAYLLLAQ
MAGVLKEGFAPHLVGLVPQICTVLQESEGEVVPASVKGEGGGAEGEEEDD
DDDYSGRAIYDVHTGMLDVKKAAAFCMGELAQHTGGHYAPYIEMSLVPLE
KLTQSFNHMLREEVAVIMPYLVISATLASPPSQPWKKADFCDTLTAPTRA
VCKAVLELLLGLTQDEDQDVVTRALISLQAVLEHVGPCWLAGHEERERFM
TVLLQIFQEQLPCQQTLEDEDDGLDDEDKETSRDLIEAGADLMGVVAKAF
GSTFVPYLDQIIQPLSTFTSATRPEGHRQAASGCLGEIAEGLGPDSKRYF
AALLPVIKLCLTDGCNSVKRNAAWCLGVMCQALGEEVQPYVMDVLQALHP
LFGLSPTEDGGAETIDNATAAISRLVIALPAAVPIAVVLPVFLQHLPLKA
DQCENPTVYKCLHQLVHLGLPDLTIHVGNILGVYGQILSKPAGTIQEEVL
VTDVLPGMRLLFQNPAYSEQASMALQKFSPEERALISQHL*
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Synonyms
Publications