jgi.p|Nanoce1779_2|549155, gene_1437 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|549155
Unique Namegene_1437
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:547602..553179 -

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Properties
Property NameValue
TranscriptId549241
ProteinId549155
Product nameSec63 Brl domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:547602..553179 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL001ncniL001Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02500NO03G02500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549155mRNA_1437-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549155mRNA_1437Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|549155

>mRNA_1437-protein ID=mRNA_1437-protein|Name=jgi.p|Nanoce1779_2|549155|organism=Nannochloropsis oceanica|type=polypeptide|length=1768bp
MEKRELLPEGSRQFWGNKGKGLPPGAVKTFKPGFEQVYIPAPVRAAPVGR
CPLVEVAGALETWSQPAFKGIKMLNRIQSEVFEAAYHSQENLLICAPTGA
GKTNIAMLALLALVREHVKEGRVQKGPSLKAIYIAPMKALAQEVVSKFSE
RLKALGLVVRELTGDMQLTKKEIEESQLIVTTPEKWDVVTRKGGEGSLAA
VVGLVIIDEVHLLADERGAVIESIVARSQRLVETSQRSMRLVGLSATLPN
YKDVALFLRASPKRGLFHFGPEYRPVPLEMTFIGVTEKQKMRQLNLMNDI
AYARALDAVRQGHQVMIFVHSRKDTTRTAQAIKNKAAKMNTLSEFSCMQT
KVFAAYAPQVSKSRNADLREHFDSGLGIHHAGMLRPDRSLTERMFEDGAL
KVLVCTATLAWGINLPAHTVLIKGTEVYNPDKGGFADLSMLDVMQIFGRA
GRPQYDTSGEAVMITTHQALPRYLALLTDQMPIESSFIKQLPDHLNAEVV
SGTVTNVREGAAWLAYTYLYIRMLKNPMAYGVTYEEAAQDPMLDAKRLEL
ITNAARVLDQNRMVRFDPRSGNLAVTDMGRTASHYYIMHESVEQFNGLLS
EILTEAQALHVLCAAKEFDEVKVRPEELDEVDQLRVGCCPLEVGAAVEES
AGKANVLLQAYVSRARVSGFTVISDTNYVAQNAGRVGRALFEVCLRKGWC
SVAAIFLRICKALDRRMWWYECPLRQFDTLSWDVVRKLEEKHASIPQLLD
MTASEIGQLVQHMRSGKIVLDLARKLPYLEMSASVQPITRGILRMTVKIQ
ASFDWSDRWHGTVEPWWIWVEDAENERVYHSEPWLLHKRQRNEVHVVAFT
IPIFEPLPPQYTVRAVSDRWVGAESSVTVSFRHLILPDRHPPHTDLLDLA
PLPKRVLQHEEFESLYCFSHFNPIQTQAFHVLYHTDANVLVGAPTGSGKT
LLAELAVLRLINQTAQATANARAKTVYIAPLKALARERLQEWRKKLGETL
GLVVLELSGDVTPDVAALKRADIIVATPEKWDGITRSWKKRDYVGDVRLL
IMDEIHLLGEDRGPVLEVIVSRMRYIAAQKRRPVRMLGLSTALANPRDLA
DWLGVGPEGLFNFRPSVRPIPMDVHVAGFPGRHYCPRMATMNKPTYQAVM
EHSPRKPALIFVSSRRQTRLTALELISLCAQGEDPKCFLHMPEDEVADMA
LTCRDAALRHTLVFGVGIHHAGLDDHDRVTVEMLFVTGKIQVLVCTSTLA
WGVNFPAHLVVIKGTEYFDGKTGRYVDFPVTDVLQMMGRAGRPQFDTHGV
ACILVHEPKKNFIKKFLYEPFPVESSLKGVLHNHLSAEIAGGAILSKEMA
MEYLTWTFFFRRLVMNPTYYHLEDTAPEAVQRYLLELVDGTLQELAEAGC
VELDEDNFGVKSTVLGQVASYYYLDYRSVGRFREGAPVEAKANAIVPALA
TLLAEAQEYEELPVRHNEDLLNAGLAEEVGWSVRGWDMGSSHTKAYLLLQ
AHFQQLALPIADYVNDTKSVLDQAPRILNAMVDISADLGLLPAALGTMRL
AQMMVQALGEDDSPLLQLPSLRNVIGEGVKVGEREGKRRTGEELRGWVMA
DEKRLRQLLVEKGISGVEAGRVAEDLRRLGVVTVKKVRILEPVDGLDGKG
GDEVTLTCRPGRGGGPPMTRSRFNKHQAKQGGGGWWLALGEAEEELLALK
RFTVGQRGGDMKIVLTFPAPVAAGLATLQLHLKPDNFLGLDQRVEVKVEA
VGGKEEENFIRTCTEIR*
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Synonyms
Publications