jgi.p|Nanoce1779_2|521687, gene_1379 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|521687
Unique Namegene_1379
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:425051..428167 +

Link to JBrowse

Properties
Property NameValue
TranscriptId521773
ProteinId521687
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:425051..428167 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016070RNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01940NO03G01940Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|521687mRNA_1379-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|521687mRNA_1379Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|521687

>mRNA_1379-protein ID=mRNA_1379-protein|Name=jgi.p|Nanoce1779_2|521687|organism=Nannochloropsis oceanica|type=polypeptide|length=906bp
MAGNGGASSGKKQPKKKASLSRKELRKQERQQKKQRKVTLVAGGKRGRPD
ESSPRAGNAGTKRPRQSTNGGSAPSSIAGISVPVRKSLGLVERARGDKAS
TTISSRKSISGSSSTNSCSKTNKASETATDATLAAVRKDPYILAEEEEIR
YLERKLGLAGKDAKKKEDKLLRDLMKYEGFDDSIGDLLQATNRISELVGG
RKSVGGSGSLTKNKATKKKEDEDEDEEEEEDEVDFENLNTLRADGGEGGV
PDFFSSDEEGEEIIANAYRPVQGEDIYGRSTDPSLSTNGPAGRYVPPHLR
RAAATPATATGAAMIEGDDTSSPEYVLLKKMMNGLANRLSETNLEASTRE
LCSYYSSHPRSRVNKLLTDTLLALCMNKTQVMKAIVPVYAALVAGSHFGG
GGSGGGGVGAFVLERICREYDATREKLEKVGGSEEEQEEGEEERLARELD
NLVLILGYLYAFGLVACGLIYELIRELVAKLGERDVELLLLLLRTTGHQL
RGDDPAALKDIVLAVQERATEVMECGREGEGMNARVRHMLETINDLKNNK
RRQAQLQELERTQRLKKVVQRTRSSSGGSSSSSRKGGGDTLHLTWADIRA
SDARGRWWRVGASWTGKQSEGEEDNGGEGTGKSKSSGGRRSSSSSVTDTT
LQAKMTKLAAKQRMNTDVRRAIFASIMTAADYQDAFERLMRLNLTDQQER
EVVRVLVDCAGQEKNYNPFYAYLAGRLCEYHDKYKFTLQLTYWDIFKLLD
EEGAGFATSAHRRTVNLAKTLCHLIAKGWLSLSVLKVVDVAALGEGGGVF
FRAFFAEFLDEERCPDNEVLGAVQRVGLSKNHLTLTETLTAFLHQYALSG
GEKEGGVGGKKRKKRARSVVKLLDKLSVSQFMGEGGGESGRRGRRGGRDD
GWDGV*
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Synonyms
Publications