jgi.p|Nanoce1779_2|626698, gene_1340 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626698
Unique Namegene_1340
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:335007..340812 -

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Properties
Property NameValue
TranscriptId626784
ProteinId626698
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:335007..340812 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0005524ATP binding
GO:0015662ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015914phospholipid transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01590NO03G01590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626698mRNA_1340-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626698mRNA_1340Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626698

>mRNA_1340-protein ID=mRNA_1340-protein|Name=jgi.p|Nanoce1779_2|626698|organism=Nannochloropsis oceanica|type=polypeptide|length=1581bp
MSQHYGAAASGEPLIPPSPRPPRNDNELATVREAQRQQCVRSPILDMVLR
FITPRSPDDHHPSPSPFSSSSTSSNNNGTCIRRFHVLSPTYPMHVRTTKD
GKKRRFRYPDNSVSTAKYNIFTFLPRALFEQFRRLANIYFLVVTVLMLIG
TYSDLYQSPLTPFTTLFPLIVVLAVTMGKEAFEDFKRHTADQNTNNRAAR
VLRLVSTPVTNNGEGELEEVFWKNIGVGRIVKVLDKEEIPADMILLTSSE
PSGNCCIETSNIDGETNLKIKEAARTGENGCGRAFVTAADLQGWEAAVEC
EAPNSRIHTFTGTLQLAPKDRNQEQQQRRVGVNQANLLLRGSRLRNTKWA
LGLVVYTGYDTKIVMNSRAAPSKLSTIEVTTNRLLYLILGMQILLVSVTL
GAYLVWTDANESQLHYLCMDYLGGPSAFLRMNCQATAKEASELGMWVTFL
LLYNNFVPISLYVTVEMVNYIQAYYIDQDLSMYDPSSDTPALARTSNMNG
DLGSVRYVFSDKTGTLTRNIMEFRRCSVGGVVYGNLEGGREEESVERGEE
RQQIQGEEERTSGSSAGSGGRREGAQGHRFSLPVDPFALRGKALQELAEL
SNACEGKSVEEMISKTPASDSAAATVAVYFAECLAVCHTVVVEKPAPSSP
PPPPPPPSSSFSSSSSPSRGGGDRNNTTATTTTKTPKPKRLPLSYQAESP
DEEALVNAVARELNWSFLGRTPTSALVLNPQNQRLTYQVLAVLPFTSTRK
RMSVIVRTPDNKIVLLTKGADNVIFERATAYLGTTRQELDAHLSVFAADG
LRTLVLARKEVDEDDFQSWLDEFQKASTAVEGRSERLAEIGEKIERELVV
VGATAIEDKLQEGVPDTIAHLLEAGIKVWVLTGDKVETAINIAYSCRLLH
AKMTLIKVIDPKDDGEGRREEEECDAALRKQLRKLVAHFEQLVEDKTLVG
GLWASSRSYQGERDCKRWLLWRWCRGRCRSQGGRKRREKRSTALSYTTAP
AELHGGAGRGGRGEGVAAGMLSEPLVEHDVDEDDAMPYSHMSKNPLKDVQ
SDHLALIIDGPALARVFGDWEMERLLLRVATLCKSVVACRVSPAQKRMLI
RLVKKGVKHPTPITLAIGDGANDVAMIQEAQVGVGISGREGRQAVNSADF
AIAQFRFLETLLLKHGRWSYRRTSKVILYSFYKNIVLTFVLFAYTWLTGF
SGQSLLEDYVYTSYNFMLAMPPICFGLFDRDLSADTIMGNATPDARQSER
MQHASSTTTIDHPATILAISRTDYNAAATTASTASFRWAYMSGRDNLDLN
LGQMALWLFQAILDSILIFGFSFGAMSAPRQVLSSEGDVDDLYMLGLITF
TGMLVGMLYKAATNTYTWTWVNFFFFFGSALLYVIFLAIYGSLPIVAGGF
YGVPGRMVRHPSFWLIGVSLVPTVSVVVDYIFIYLRLSFFPSPVDFAMEY
DRGYVIPEAAPAPGARREERARTVEEEEAARGEHAPFKGSEAAQAEEEAM
ERRRSGWYPGKLLVSLPLLRRLNSRISQKDKEEMGMMEAEGGLMPSSYDY
TSSSFDLGPGAGHNGGPGEGKVLARRHSRG*
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Synonyms
Publications