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Properties
Property Name | Value |
TranscriptId | 571765 |
ProteinId | 571679 |
Product name | DNA-directed RNA polymerase II largest subunit |
Portal id | Nanoce1779_2 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:232116..239436 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
Term | Definition |
GO:0034062 | 5'-3' RNA polymerase activity |
GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
GO:0003677 | DNA binding |
Vocabulary: Cellular Component
Term | Definition |
GO:0005665 | RNA polymerase II, core complex |
Vocabulary: Biological Process
Term | Definition |
GO:0006366 | transcription by RNA polymerase II |
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
protein sequence of jgi.p|Nanoce1779_2|571679 >mRNA_1306-protein ID=mRNA_1306-protein|Name=jgi.p|Nanoce1779_2|571679|organism=Nannochloropsis oceanica|type=polypeptide|length=1800bp MDSYFEHSKARVRPVARVQMSVLSPEEIRRMSVTQATTVDRQPIPAGITK PENYFNGKPVYGGVNDPRMGSLDRRDPCKTCGCTYNQVGQRNRVNECPGH FGHIELAKPVYHVGFVDDVLRILRCVCYNCSRLMVDPKDEMVKRIVATRR RAARLKALHEICVKGTKRVCVGSPVPEGIALADPFAAAAAAEDQGCGAMQ PVYRREGLRVTVIFPDVVEGGAPNPDRKQYLPAEEVYRIFKNMSDEAVEM LGLDLRWARPEWLLITVFPVPPPHVRPSVVMDGSQRSDDDLTHQLATIVK ANMKLLDAKKKGEPRDIQEKLELHLQEKVANFFDNERNNAEQEKHKSGKV LKTIRQRLRGKEGRIRGNLMGKRVDFSARTVITADPNLQIDQVGVPRSIA LNLTVPETVTRLNIQELQQLVENGPDVHPGAKYIVRDDGTRQDLRYAPST SGVALNVGWTVERHMRDDDVVLFNRQPSLHKMSIMGHRVKVLDWSTFRLN LSVTTPYNADFDGDEMNLHLPQTLNARAEAEQIMMVPRNIVSPQANSPVM GIVQDALLGCSRLTRRDTFVERDVMMNIMMWVGSLGIEHQVPVPMPAVLK PRPLWTGKQVFSLVLPKGCNHRGNSNMKAPPKDELNSNDSQVLIQDGQVV TGVIDKRSVGNSAGGIIHVTWLDHGWKETARFMIQVQHVVNYWMLQNSFT IGVADTVADTDTLTNIAKEIEVAKGKVRRIVEDAQQGRLEPQPGQTVFSA FEMNVNTLLNSLTERVGEMARNSIDYTNNIVAMILGGSKGNNFNITQIMC CLGQQNVEGKRIPFGFARRSLPHFSKDDYGPESRGFVENSYLKGLTPQEF FFHAMGGREGCIDTAVKTAEVGYIQRRLVKFMESVQAKYDRSVRTVKGSV IQFLYGEDGMDAVFIEKQGLRHLELNRRTFEARYVLDVLDDAFGQIPGKP GEYYLSESVRTACRRDTATATLLQEELSQLLEDRAHLARVLTARPRGKET DTYLPVNLDRLITTARRNERITDRTQSDLDPKDVIQAIKDLCVKTVVVPG EDVFAKQANSNATIMFHIFLRSTFASKRVLYEFRLTSVAFKYILGQVEDH FIQAQVAPGEMAGVQAAQSIGQPATQMTLNTFHLAGVSAKNVTLGVPRLN ELLNVAKTCKTPRMSVYMYPDAASDQAKVIRLGQHLEYTTIEDLTLKSEI VYDPDPKTTVVEEDEALLEYWYGVDVDGDADGEGAASPWVIRIELDKDKV AAKRVQLEDLQALIMDVFGPETFQIIVSDQNMPRQVLRLRFVPDDDEDVD IEFLKSVEEQIRSKLKVSGYDKILKVYGLTDDIKTWHPDSGFSDRKEPYF VTHGVNMMEVMACADVDFTRTTCNDLIEIFESLGIEAARSGMLNEIRSVL FFDGGYINYRHMSILVDVMTFRGALTAVSRHGINRGEQGPLLRASFEETV EVLNQASLFGEYDDIQGVTENILLGQIARVGTGVVELLLDEEKLKNAQEM PEYGGGMIGGDDDGMGGGGGGFGAGTPGALTPGIATPYGAFGHGAYGAGG ASPGAMLTPGVHLGGGGDMTASPLGTSPFVSPMVVSPGRATPGYDAMASP YVGGGGGTSPYTSASPAYSGGYRSVSSPGIGLGTAASPAGGGYSPSSPAY SPSSPSYSPSSPAYSPSSPAYSPSSPAYSPSSPAYSPSSPAYSPSSPAYS PSSPAYSPSSPAYSPSSPAYSPSSPAFSPSSPAYSPTSPAFSPSSPAYTP TSPQYSPTSPAYTPSDMGSPAQDAAYSPSSPVYSPTAAVDDGEGDVKKE* back to top
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