jgi.p|Nanoce1779_2|535188, gene_1251 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|535188
Unique Namegene_1251
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:100396..107600 -

Link to JBrowse

Properties
Property NameValue
TranscriptId535274
ProteinId535188
Product nameDENN (AEX-3) domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:100396..107600 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00740NO03G00740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|535188mRNA_1251-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|535188mRNA_1251Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|535188

>mRNA_1251-protein ID=mRNA_1251-protein|Name=jgi.p|Nanoce1779_2|535188|organism=Nannochloropsis oceanica|type=polypeptide|length=1659bp
MTSHHPAHALDQQYSRRLIDYFGVCGLSHHDPQIEIEALDTYNGEPWWEL
VSTTPSTTPGTIEGVQPSLPLSTFAESPRVSQAGSTAILSAQATPPHTVA
RHDIMDVTIHLPDEVLPPGYTILAQTIGGNKGDLDNKGYFDRGSHGAFIC
YTRRGPQDRGPAIAELMVLSKGQALPPGFELVTTSVGGKPLKEVRLAVRR
QRYDAAHRYFEDRAVTGLYLVCPTKGESLPITETQGGSSSSKIVEVEPPS
LLGSNDARSLSSSSSFSSSSEISLSGHRVGGSGYHLLEESVSFKSGKGLL
LAYRTTPCPMGLCEVTFKGEVLDRFPRDDHHDFALPLDVLPMFSYPKGIR
IQRVRADKPPEPSYCSYVLTDEHGRNYYVASLTLSEPLSPAMTLQVELAI
KKELIRRGRYKDHLEDVMERCLVDERKKHQRQGGGGTGPHLQSHSHSQRR
QKHFLVSPKVLICVSHWPVFNFMKKWLSQVYMLGMTQSPVPLERCIEHFV
TQVPVPEAGGPPLSLHIHDMMEPIILARPRLQGLPFLDLSFATLFRCLDV
GNVLTVMALLLQERKILVVAKYESVLTEAMEALRALLFPFKWESCYVPRM
TESMLGCVEFPGGFFLGLRDDADEEGSSKSRVQHLLCDCDDVVLVDLGRN
LVTSASPLLPVTFKGLPSKLRQTLQTRLTITLAKANILPGCGFSSNPDHD
LDFPGLSIATHTAHHQKHPPLDDRAIRDAALCFMLSLMKGYRDNLVVPGL
HHGHREIFNKQAFLDQCVDKGNRSFVGKMMGTQLFSSFIQRRTEASDPHL
LFFDHCMTSYSTVPDAWTAVTPVPLNNKHLLLLIDRVENLEITASSSSYR
VNSPSLKMMACRSSSSVVASSPRASSLLSSGSPSSFSSLTSGRLPPALPT
SSTTSRPKATVHAFNDITPPLSSLGPLRNMSISTPSSSSCCSPSSGDIKT
RCIFQLPKCLALHFYGSWFMCLPLLVQSALEDEKEDLIVRAFGVLAAMQA
DRQVSPDETIYRALLVAIVRSGDANCHRSDAVHLLRELTALGIKPNAITY
GQYTRAIAEDYARKNTNFQVHEEAALPSALELVRNRAPSLYLNFLDHTRM
QQWNLGTRWRQRLLPSADPGESTAQYHRLSRPPSIHQRRKSLPLSSSDQH
HHCQQVSGSSSYHSPIATSWSFSLDHRMRAEDLDANTFGVVSISNSIPCE
CGHIMLDEDLTGGWHVAEGLEGLATVSCIGCKMVISPQLQVRCCLLQYIE
DVFTRKTSSSAGQRMEMEGNDSQQHLPASSIRKRPLYHMTTECSYMSPAA
MRLGLEHLIKEHGEHALYRETMLTLCPDLFWNLWWYSARFGLPLPLPAKS
NQEESNEPGETAKHSPHLLLISGWDTALVEKAAQSAFLTLQAFNKRKMAH
RFRDILEKSALAAVNPTASPIAMPLVGPPSHISNSSLDDLALSTSSLALA
GSSSLAGTAAATRNAELLELLTTQALQELRGDERGKNDDGSVVYDVAGLV
RAAVHDDTMNRLTKARETPLGCLHALVQAGIDEDSDEGLGPAVRFFLTLR
RDESDPLFQQGMYRILFYLAIKTPLGGVKGEKSAPGACRIGSHHERCSSR
GDEALYGKFEQLYTKACQEISNHQEKTEAEGPLALRLPLDAAPTEAVLAS
RSIFMHLF*
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Synonyms
Publications