jgi.p|Nanoce1779_2|537141, gene_118 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|537141
Unique Namegene_118
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:312926..317445 +

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Properties
Property NameValue
TranscriptId537227
ProteinId537141
Product nameatp-citrate synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:312926..317445 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004775succinate-CoA ligase (ADP-forming) activity
GO:0003878ATP citrate synthase activity
GO:0003824catalytic activity
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0044262cellular carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01420NO01G01420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537141mRNA_118-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537141mRNA_118Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|537141

>mRNA_118-protein ID=mRNA_118-protein|Name=jgi.p|Nanoce1779_2|537141|organism=Nannochloropsis oceanica|type=polypeptide|length=1092bp
MSAKAIREYYGKQLIARWLPEYSNGRHTIEKKQVLITPDVLEPTKGLSFE
TIADANPWLLTDKLVVKPDQLIKRRGKAGLLAVNKTWQEVQAWVLERMQR
EVQVEMVKGVLNHFIVEAFVPHKQEEEYYFCIVSNREGEEILFTHEGGVD
VGDVDAKALRCQVPLQEQPNPEAIKAALLVHVPAAKQDFLATFLEGVLKL
YRALNFAYMEVNPLVVTEDGRVVPLDLAAKIDETASFLCGPHWGHIDFPA
PFGRREFPEEAYIRELDSKTGSSLKLTVLNPAGRVWTMVAGGGASVVYAD
SIADLGQGQELANYGEYSGAPNEQQTFDYARTILSLMTRVKDPRGKVLII
GGGIANFTDVAATFKGIITALRSFQEELREHNITVWVRRAGPNYQEGLRI
MRELGTEIQVPIKVYGPETHVTAIVPLALGLEDPKDYPEFDETSTITTVP
KPAQSLPNDPADLAPPDAIAPEVTPSATKHRIVNFTPETRCIVYGLQQRA
VQGMLDFDFLCKRKKPSVAAMIFPFSGNHYIKFYWGTEETLIPVYQTTEE
AIRRNKDANVVVNFASFRSVHETMMEILRFSDQIKTVAIIAEGVPESQTR
DINLVAASKGVGIIGPATVGGIKPGCFRIGNTGGMLDNIVSSKLYRPGSV
AYVSKSGGMSNELNNIISRNSDGVYEGVAIGGDRYPGTGFIDMLLRYNDD
PAVKMMVLLGEVGGTDEYAVCEALKSKRITKPLVAWCIGTCASIFPYEVQ
FGHAGACARGMGETAAEKNAALKAAGALVPQTFDKFGHIIREVFDKLVKS
RVIVVKPEPEVPKVPLDYTWAKKLGLVRKPANFISSISDDRGDELRYAGM
KISEIFEEDLGLGGVVGLLWFRRRLPPYATKFIEMVLMVTADHGPAVSGA
HNTIVTARAGKDLVSSLASGLLTIGPRFGGALDDAAQMFTNAHDSGMEPA
EFVKMCKTENKLIMGIGHRIKSLANPDARVVLVKEYAKTHFKNCEVLDFA
LGVEQITTAKRDTLILNVDGCIAVCFVDMLRSCGAFTREEADDLIENGCL
NGLFVLGRSIGFIGHYLDQKRLKQPLYRHPWDDITYMQEFS*
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Synonyms
Publications