jgi.p|Nanoce1779_2|675113, gene_11556 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|675113
Unique Namegene_11556
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_75:54697..61201 +

Link to JBrowse

Properties
Property NameValue
TranscriptId675199
ProteinId675113
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_75supercontigscaffold_75:54697..61201 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL097ncniL097Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G01790NO29G01790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675113mRNA_11556-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675113mRNA_11556Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|675113

>mRNA_11556-protein ID=mRNA_11556-protein|Name=jgi.p|Nanoce1779_2|675113|organism=Nannochloropsis oceanica|type=polypeptide|length=839bp
MAYTLSALTLNLVSTTIVPISASMPSFESCDDNAEDIDSSFAIQYPCTSW
SSSTKRNKPSSFAIDATALFPEAAPRPSALHHGQLQDQGGSQPMPGGVKE
GRGVLPPLQMQQQQHHPKGNTYPGRFLHGRLDPLDDSGCDNAEQPPVGEV
CRGGKEEEEEESVEEGEESEDEGEDEDEEGRKGTRDAVVERASQRKGADE
EGKEGGRGAGNDAATSMERNAEEDEEGRNDPPRFLYEQRQQQLLQHKELK
GKGEEGIPTPHNPPSPSPSSVSSSSSSTANLFDSRTPSHPSSSRSSSSAT
TLPSPVWTAVDDAKLLRVMNDESCIQWSHVFPFFPGRSSSSCMRRWKEIK
SDARSNRLSRRKWTKLEDLLLFQHVLAYMAQQQPVDWKRLADLRPFRSKK
ECLHRWTNFLDPNLNKSKWTPAEDRALIDFKLRHGSTWKNISAFFPGRPV
YAIKNRWYGRLRHDLSRGEAKREKAREGENEDEDELVNLRIIQAEEEGEK
SMEEARHETAATGAGELEGQQRGTPRSSSSSRSSSSSSSSSSSNDKTAKS
KVPIHITKESTDPDISPALPSSLVHVQPVYPAAFLVKNEDGREGGEQGEP
LQLSISLELIDLFPHLNKAAQAAILETLRGSRPVEKERKGEGAPSSTATA
VTAATAAAAAAAAAAADRGVYAPVDLHAHLHSHQHNHQPARPPALVHPTP
RMATVVAVEKGKEGGKEGEDETKAEMAAAKAELEAKRAAKIAARAAKAAA
KQAARLAREQKRREGPKRRPRSQPISSLLPLPVAMERQHQPPQQQRFKGQ
RAEEDGKERGEEGGEEVEDLWTPDGIGFEVDGDFWEVL*
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Synonyms
Publications