jgi.p|Nanoce1779_2|550512, gene_1107 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|550512
Unique Namegene_1107
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:1237522..1240907 +

Link to JBrowse

Properties
Property NameValue
TranscriptId550598
ProteinId550512
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:1237522..1240907 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0044249cellular biosynthetic process
GO:0009086methionine biosynthetic process
GO:0044237cellular metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046522S-methyl-5-thioribose kinase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05150NO02G05150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550512mRNA_1107-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|550512mRNA_1107Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|550512

>mRNA_1107-protein ID=mRNA_1107-protein|Name=jgi.p|Nanoce1779_2|550512|organism=Nannochloropsis oceanica|type=polypeptide|length=838bp
MTAANNLPSSFSSSSSSSATPALQSLIYTPRSAQTGPPSLQVLDQLHVPR
SKAYVPIHTTQDAWKVIRDMNVRGAPLIAIVAILSLAVEMSAKEEGFASL
DAASTWLAEAAEYLKTSRPTAVNLFTAMDEVVTLSQAVVEGERGKGASNS
KAATPLVLAVVTFAERMLKEDVESNQAIGNHGAMAILSNTLPGKGVKIMT
HCNTGSLATAGYGTALGVIRSLHKTGRLDRVFCTETRPYNQGARLTAFEL
VQDRLPGTLVADSMASFLMASKGLDAVVVGADRIAANGDTANKIGTYQLA
VAAKHHGVAFYVAAPFTSFDLTLSSGSQIVIEERPAQELTHVQSVQVAPE
GIAVWNPGFDVTPAALITGIITERGVIYPSPVAAFDVQGFLQGEGAHGFP
SASAPISSSSSSTTTTIKAPKEYEPLNEGKLGPFLQAHVPHVWRMLGADT
LSDVAVTEVGDGNLNFVFLVTGPKTTVVVKQALPYVRCVGESWPLTLERA
FYEEAALEEEGKRTPGLVPEVYYFSKRLALIIMQYVPPPHIILRKALIRG
DTLSTLATDLSDFLALNLFYTSSLHLTGPAKRAAVSFWSGNHGLCALTEA
VVFTEPYCNDVVHNRWTSPALDDIVRELRNDLPLKLAVGNLKAKFMDATE
ALCHGDLHTGSVMVMEGSTVVIDPEFAFYGPMGFECGALLANFWLNYFSQ
EGRGEKEGGRAGYAEWVLAQSMAIWNGFMQKFLALWTDEATHKGELFKRG
AYANPGELEATQEAFVRNLLVDTLGFAGCKMIRRIIGIAHVEDLESIEDM
DVRATCEKKALKMAREMVVNAAKYRKIEAVAILAKQQ*
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Synonyms
Publications