|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 675066 |
| ProteinId | 674980 |
| Product name | pre-mRNA-processing factor 8 |
| Portal id | Nanoce1779_2 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_66 | supercontig | scaffold_66:23237..45020 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
protein sequence of jgi.p|Nanoce1779_2|674980 >mRNA_10991-protein ID=mRNA_10991-protein|Name=jgi.p|Nanoce1779_2|674980|organism=Nannochloropsis oceanica|type=polypeptide|length=2500bp
MVEEQRPGTRAPVFKRGTDHKGLEDKQQQQQQQLQQQLQQQQHEVMDPRY
PQGGSGGGPPPGYPPPPPLSHGGPPPGFQLPHHQQQQQFLTGGYPPQQTQ
GGPPPPGFPPPPPGFPPGFPPGYSGYQGGMPQGGPPPGFPPSLPPGFQGY
QPQHIPGPPPGFSSTPYSRPPPTGIPYIPPPRPSPAAAAAARAEAEEAEA
RARETPEERKERLLEDKAKKWQALQNKRYGTKKKFGFVDLYKEDMPPEHV
RKIIRDHGDMSSKKFRHDKRIYLGALKYVPHAIFKLLENMPMPWEQVRNV
KVLYHVTGAISFVNETPWVVEPVYIAQWGTMWIMMRREKRDRHNFKRMRF
PPFDDEEPPLDYADNILDVEPLEAINMDLDPEDDASVYDWFYDSKPLLHS
KHINGPSYRRWRLNAFYTAKALNLAIPGGPKFEPLYRDLDKDDEDWNEFN
DIGKIIIRHPLRTEYRVAFPFLYNSRPRSVHMAPYHCPMLYYIKAEDPDL
PAFYFDPLITPISAHFSEGDKSAEEEVWQEEDEDAFSFASNGLGAGFTLP
PSVRPILEDRPLYTDTTAAGIILYWSPRPFNLRQGRTRRAEDVPLINAWF
KEHCTSTAAVKVRVSYQKLLKCWLFNQLKSRPPKSQTKKSLFRSLKATKF
FQATELDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPTKTLT
TKERKKSRFGNAFHLTREILRLMKLIVDSHIQTKTRIVITRLGNVDAFQL
ADGLQYTFAHVGQLTGMYRYKYRLMRQVRMCKDLKHVIYHRFKTGPVGKG
PGCGFWAPGWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSGGAAKTVTK
QRAESHFDLELRAAVVADILDMMPEGVRQNKARTIMQHLSEAWRCWKANI
PWKVPGLPAPVENMILRYVKQKADWWTDHAHYNRERIKRGATVDKTVCKK
NLGRLTRLWLKAEQERQHNYLKDGPYVSPEEAVAIYTLTVHWLESREYRP
IPFPPFNYKHDTKLLILALERLKENFNVNVRINQSQREELGLVEQAYDNP
AETLQRIKRQLLVTRHFKEVSIEYMDLYSHLIPVHDISPLEKITDAYLDQ
YLWFEADKRGLFPNWMKPSDSEPPPLLTYKWCQGINNLQDIWDTSQGECV
VMMETQLENIYEKMDLTLLNRLLRLVVEHSLADYMTNKNNVVIAYKDMQH
TNSYGILRGLQFASFLLQYYGLILDLLVLGLKRASEMAGPPQMPNDYLSF
KDVFMLFKFDAEDSRDLIQRYLTEHPDPNNENIVGYNNKKCWPRDQRMRL
MKHDVNLGRATFWDIKNRLPRSLTTINWEDTFVSVYSKDNPNILFNMNGF
EIRLKPKCRMLMEAPVHKDGVWNLQNETTKEMTAQAFLRVDETSMKAFEN
RIRQILMSSGATTFTKIANKWNTSLIGLMTYYREAVINTQEMLDLLVKCE
NKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRY
SKQTETGVTHFRAGMSHEEDQLIPNLFRYLQPWESEFVDSQRVWAEFAVK
RQEAHAQNRRLTLEDLEDSWDRGIPRINTLFQKDRMTLAYDKGWRIRTEF
KQYQLPRMNPFWWTHQKHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKG
TYFPTWEGLFWEKASGFEESMKYKKLTKAQRSGLNQIPNRRFTLWWSPTI
NRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMD
LCQVFDQELDALEIENVQKETIHPRKSYKMNSSCADILLFAAYRWTISDK
PSLLHDTKDAYAAKTDNKYWVDVQLRWGDFDSHDVERYARAKFLDYTSDA
MTRYPSATGVLIAIDLAYNLYSGFGYWFQQGAKPLLQQAMAKIIKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTI
HKTFEGNLTTKPINGAIFIFNPRSGQLFLKIIHTSVWAGQKRLSQLAKWK
TAEEVAALIRSLHVTEQPNQIIVTRKGMLDPLEVHLLDFPKVVIKGSELQ
LPFQACLKMEKLGDRILRATEPEMLLFNIYDDWLKTIPSYTAFSRLILIL
RALHVNQDRTKIILRPDKSVVTKDHHIWPSLTDEQWQKVEVQLKDLILAD
YGKRNNVNVASLTQSEIRDIILGMEIAPPSLQRQQVAEIEKQAREQSQLT
TLTTRTQNVHGDELLVTTSSQYEQRSFSGKTEWRVRAVSATNLHLRTQQI
YVNSDDINEEGYTYVLSKNTLSKFIRVSDPRTQIAGYVYGVSPPDNDQVK
EIRCIVMVPQVGSHKSVTLPMKLPDSEELKDLEPLGIIHTTAHETNQLAP
ADVIHLAKLVADSKGLFDPEKSIVITCSPTPGSFSLTSYKLTPKGLDWGK
ANMKETGEVVSGYSPAMYDKTQLLLSDRFLGFFLVPADDCWSYNFQGIRH
SLGMDYSLKVGNPKEFYHEVHRPAHFLSFATMDADNNLAAEADLDDNFA* back to top
|