jgi.p|Nanoce1779_2|613206, gene_10919 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|613206
Unique Namegene_10919
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_71:66201..70889 -

Link to JBrowse

Properties
Property NameValue
TranscriptId613292
ProteinId613206
Product nameProtein of unknown function (DUF3608)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:66201..70889 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL094ncniL094Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613206mRNA_10919-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|613206mRNA_10919Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|613206

>mRNA_10919-protein ID=mRNA_10919-protein|Name=jgi.p|Nanoce1779_2|613206|organism=Nannochloropsis oceanica|type=polypeptide|length=520bp
MQISLLKSVAEAFGLHAFEEVAVRKAEPSTARLDFVELTFKDDFISRADM
WRFKLTITSSSVGKAAYLGQHIKTLGIRARVKELTRGEKPVRSGILTTET
KMTFRSRSARIFWLVQMSYEMWDYAPDGEVYLSKFLAFVRLLLESWRALD
VSHSLSVVFFTRLYYHPPPPPSSPPSSPSFSTSSPFPESHGAREEGKEEA
GQEEEEGPTLSEASPLVRPSHHTPPVTPFTPRPCPSSPSSSASPAAAQAG
DSLPFLSSPLASSLPLCSTSSTMSASPPPAPPPPASSHSSVDSRQRVKDD
AEEGGGSSSSPPFLHAVSPPTSVTSGAATAQPPPPPPPPASSPPIQSPGS
CARSHSQAQGGPGARGGRGMSVDGEGRVFQDFYRMALENVSRIETQKLLT
ALKRESMAFARGLRWKTEEGWTGVPAKAARGNFLEAINVTLNVLEKHHMD
RDLTRTGNSILMISPSTGVIEVDSKLSGITKQRMMDNGIGMDLLSLAQPP
LHTVPLFICKDKPQLNSQG*
back to top
Synonyms
Publications