jgi.p|Nanoce1779_2|643555, gene_10804 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|643555
Unique Namegene_10804
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_69:8355..18238 +

Link to JBrowse

Properties
Property NameValue
TranscriptId643641
ProteinId643555
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_69supercontigscaffold_69:8355..18238 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL091ncniL091Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00190NO10G00190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|643555mRNA_10804-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|643555mRNA_10804Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|643555

>mRNA_10804-protein ID=mRNA_10804-protein|Name=jgi.p|Nanoce1779_2|643555|organism=Nannochloropsis oceanica|type=polypeptide|length=1362bp
MASFFNRVLDKLDTALEAFNSAVDGKEEEEDEEEEEDDDDEEEEMKGEED
DEDEGHIQTAVARADIAAAGAAGRPPQEPLPVPPAQPLPTPPPEEEGKSG
ERAVALFPPPLLPITAPSTNVKLPTGRSSSAPVPRDAAVAAGPGDTRRSP
ISQPAQDEQGYGMMPPDPENQQQQGQQQQQGQQQQQDEDMAAALLLSSST
ILPALPPPLQEQQQQPHQESTGHVFEREMRVWDKQGERKGGRERGKKRRV
SVLHDPRKMGGGEGKAVEEEACMDEEEDEVSKMHHPRAHCLQPSFHMQQG
KKGPVGVQNPTVLNAAGVFTLRLKQAYDLPLPPGTTIYAKIGLWPWNERV
NTALAEVGIGRDACWTSPHWKEAGEGEGPSSYSLLHPYNSASTPLPCLRL
GLYASSSAASLTTILDRCVGVAEIPLVPVLAYPRVEVERWHTLKDQGSQK
EEEEEEEEEEEEGAEKGGGRMRGERASNAVHQQPPSVVSFSVAEHLFTLH
SYRNLTFCGVCDSLLLGLIRQGYRCERCGFDVHQECQLRLPNGSIRHHHA
ASFLQNQGQDDVRDFYCRIKLGPIQAGRGNKSVISHRTRTIYQTSDPVFT
EQWTLDVPHYRASLSIELMDAARERVVGKAEWPVFRLLQEEADRAMGGRE
GGWEGGGQEEEEEEEEEGERVAPLIVNDKEVGYLRLSLRMKEDNASLFLA
QRPRRVPAPPQEELAVESFRRALDRLQALLAYLRALESSYSYIMSWEHPP
STLALLLLFVYLCLYTDAEKAGSLLVFAILTFMTRALYVRSTGQYAQRWV
KHDPEEDAAAGGDGSSSSSSSSSIAKRPYRAIAKLKISVDRARFARAAEG
RGSTYVTITYAHHGADPQEADQDLVVGCCSGMVGDEGSFGMLKELDLDVS
LPFIATAQLGGRAERASLFRNICVWDEEGGEEEGEGAGREGRGRSSSLSA
AVGEGHRRWSLLWPVLQPIGFAPGQASSSSQKKLEALPFTAATGCLRIRA
YQDSGLSTFEGEYLGQALLPLAPLIEQALSPSLPGSEREGKTGGRTGKLL
FVKKQEKCINKQSSSSSSSSSNNKKPSVLHSPTKEGREEDEAEDQAENGE
AGGGGVLSSVWNLRSTVRHMQNLLDGYLSYAESWKNLLNWTHPQKTLVIY
GALWCLWLLCIVVPTRYLILMGGLYEFTFRLLPEQDEYPNVIRAENLLAS
IPNDDDLRRAYQQENQIYLRKKKERVQDQKARRARLSGMWGFLWEGNIQT
RAAASNQPWRQAYVAVQGNRILWWKAEKDLDKGGVRVPEGQIILRGHAGL
TSPSPLEVKELGPDKASLLVCVFGRNLAAKTQERRSFMCVSAEDHAGLSA
ALATALDFKQS*
back to top
Synonyms
Publications