jgi.p|Nanoce1779_2|408594, gene_10745 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|408594
Unique Namegene_10745
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_73:47667..56799 +

Link to JBrowse

Properties
Property NameValue
TranscriptId408680
ProteinId408594
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_73supercontigscaffold_73:47667..56799 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL096ncniL096Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|408594mRNA_10745-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|408594mRNA_10745Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|408594

>mRNA_10745-protein ID=mRNA_10745-protein|Name=jgi.p|Nanoce1779_2|408594|organism=Nannochloropsis oceanica|type=polypeptide|length=1202bp
MDEGASLIFMTLPRRTGRREEEVEDGYEEREGLHPLAEAMLRHHQAKQGR
EEYERMQTSRRKLPAWSLRESIISTVRKHQLVVISGETGCGKTTQVPQFL
LDDAIHAGKGHETHIICTQPRRISAIGVAERVASERAEAVGEMVGYQIRL
EKMAREETTKLLFCTTGILLRKLQLNPLLNGISHIILDEVHERSLESDFL
LIILRDVLPSRPDLKVILMSATMNSHMFASYFTSSSYHQDLRTAGAHLPA
RPPPRPPSIVKSKGGGVVDAVPIVEIPGFTHPVQQFFLEDALEWTGVDLK
AEIIAAAIGGRGGGYSSFSSSSSSSSYPFSSSSSSSSYPSSNGRGSAADF
AAQRRKKMKLAKMEDGYQERLAVMRSEQGRGYSLRTLESMAAFDEDEIPH
VLIEALVRKIDHEEGPGAILIFLPGWEDISKLHESLQRLPQARNWRLYPL
HSQLPMDQQREIFAPPPPGLRKIVLATNVAESSITIDDVVFVLDGGKHKE
KTYDAEKKLCMLLPAWVSRASAIQRKGRAGRVQPGKCWHLFPRRKFELDL
PPFQLPEIVRTPLESLCLSVRALGVARKGRGGIVEFLQKAVTPPTDTAMS
NALELLLHIGAIQPDEHLTALGKCLATLPVEPTIGKALIYAVLLRCLEPV
LTIVSLLSTKSPFVLPLERKEEANRSKIQLAGGEASDHKALLAAYEGWQD
AEVRGQGRDFAWRNFLSGPTLVMVADMRKQFFNLLKDAGLLPQFDSRTGV
GREYYNAHARSWPVVKAALLAGLYPNVIRVDYGKKRPTFFTQTDGTLKLH
PSSINAPPEGDRGPPSPVLFHRWMMFFQKLKTPAGLFIFDTSEVSPLAVL
LLGAGLPEKHGRLIPISSLDFPFDNYIKAKQSKKAHVHYANAKTFLGVEP
WVYFEIAGGPQATALIEDARQTLIYLLACMLESGRRKRDLMPQGHEEFIA
ALCRCLEAVEGETEKIDVHPSMQALRDRIAPYVQAEARAQDGSGNAGGGG
GGKAGSRWERGGGGGGGNGDYYTSSSSSSSSRGMVTRSGGGVGSLGGGGG
GGGGGVSNGRSAYEAPSTISAAPVLNPAVVAAKAAAVTAAAAVSSRSSRS
REGGREDEDRYRPASSASSSYDRGRGGSSSGDYRRYERSSGSSSSSSSSS
SYRRGEARDEDRDRRFRPRSPSRSRSRSPDYMRERPSSRSGGGRSNYSRY
R*
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Synonyms
Publications