jgi.p|Nanoce1779_2|345040, gene_10505 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|345040
Unique Namegene_10505
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_52:113913..115426 +

Link to JBrowse

Properties
Property NameValue
TranscriptId345126
ProteinId345040
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:113913..115426 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0007155cell adhesion
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|345040mRNA_10505-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|345040mRNA_10505Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|345040

>mRNA_10505-protein ID=mRNA_10505-protein|Name=jgi.p|Nanoce1779_2|345040|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELA
TLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDVILHEMAH
AMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLT
IETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADI
WGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEVILSLALA
GRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRRY*
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Synonyms
Publications