jgi.p|Nanoce1779_2|634134, gene_10451 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|634134
Unique Namegene_10451
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_57:42047..47954 +

Link to JBrowse

Properties
Property NameValue
TranscriptId634220
ProteinId634134
Product nameBeta-lactamase/transpeptidase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:42047..47954 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008800beta-lactamase activity
Vocabulary: Biological Process
TermDefinition
GO:0030655beta-lactam antibiotic catabolic process
GO:0046677response to antibiotic
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL079ncniL079Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G00140NO29G00140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634134mRNA_10451-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634134mRNA_10451Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|634134

>mRNA_10451-protein ID=mRNA_10451-protein|Name=jgi.p|Nanoce1779_2|634134|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MAALTPHLPSILTDFLLSPLSTHCTGRRMRLPQLSCLVLPLVSLPALQLV
HAQDQSPSEPDVEGVWVDATSNAKAWLDSGNSLPFPVAVSPETVGMSSAH
LGEADNRIEALVQQKKIAGASFSVMRNGQIVTMQTHGYSNVETEQPILAD
TIFRIFSQSKPINTAAFLTLIDDGLVEYTDPVSLYIPEFANLKVWDPIIN
GTVPLDRPVTIWHLLTHTSGLTYGFMDNTHVDQLYNQNDILNPNEDLATK
IKRVTKLPLTCQPGSKWQYGLSTDVLLLIASLVTGLPVDEFLRSRLLDPH
NIQLVDYTKRPAYLAGGSGLVSSMTDMMKFGQMLLNKGVQIPYAEDARSN
MVLAYGVPRLGEFSWGGGMSTNFWVSPQDKTVIVTMVQIMPYTQDLKFAA
REWTYRSIDAFDMKQQARTAKPFVVASVDAASGSAAVIKEGGKEVEGKKR
GLRSSSSKA*
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Synonyms
Publications