jgi.p|Nanoce1779_2|374595, gene_10325 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|374595
Unique Namegene_10325
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_60:78573..86724 +

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Properties
Property NameValue
TranscriptId374681
ProteinId374595
Product nameTranscription factor/nuclear export subunit protein 2-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:78573..86724 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL084ncniL084Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00330NO03G00330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|374595mRNA_10325-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|374595mRNA_10325Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|374595

>mRNA_10325-protein ID=mRNA_10325-protein|Name=jgi.p|Nanoce1779_2|374595|organism=Nannochloropsis oceanica|type=polypeptide|length=1133bp
MPLITKGPVLPPEPPASSAPQESPVFELLAALLKSARAWACATGVWKYLE
TAGLQPAESKVVVVALRHLLAFLIRPLVETLGVKAKIQLLPNKEVEAEGG
KEEGKEASSQGKAAGGEAGAENEVVMVGLSPLTDLASLPAAVTPILERLG
PYLADDIALYARLLRLFKAHLSSFPPSSSPSGPTFQTTFLGRSLAASLLP
AVTLTTNNPGLVAEVWEVLRLIPYRDRYTLYNAWKSLLDTKTPPTYTRWV
AAECRALNSAKYACRMVTVDTVKELTRPFARLLHSSPLMVFNYVVSRVEG
LDGAILSTWVDCLKYTNNLALDVGSFVLLQRASDERPKLQPGLPNEAPYF
KALATFTGLLYKKYPQVELLGLLEHLIDLLRPPHHSAQGLHLLHEVLNKM
GGMPGSYEEGLSERLVRGRGGGETLRMETALFGFREKVSNTAIKMLRTTL
LRPAVGRPFLLLLASQRRRLVLSDEEGEESAHMGAKDIWKRGTIFDKCSN
VFLQLSEFLGSGRLSIKYLHLTPSLEDMLGRLQLDPEVAFHLLRPLLRVA
IKQKEDESVPMLEGVTPSDLLKAFDPFSSSMQQRVQQLLPAQTWANCSPQ
LYLAFWSLSLYDVDVPEALYLEEIKRLEELIKMSQRNMIMEDTAADGLLK
TERDLRKASERKRKEKRDAEAAKGQLKEELILQKGHHLTIRKILIGLKTT
LFSPAANAAEMDEQLHTLLHHLVLPRILLSPEDAMYTATFFHLLHSLDIP
SFPSLRFFDLIVRGAAPLVFAATDQEALNLGIFLKTLLTPLHAWSCSRAV
FESEGGNKEGVKNFLAFTAAAAADPSAPSGSLSAEEEYKEYLALYATWEQ
RLWTLMATAMGKRESLLGRQLNAKETKAQEELKGKKTVAIAALRCMQQMV
DVFPSTRATADALEHAVTSLMKEAEGKEGKQDPAVVVARGFHTILAKRLK
SLKESRRPDEVKKARAALQALGGGTLTALSSSIPSSPSSSSSFPPSGGSH
HRGSSPGGGGGGGGGGGGGGGGGGKGAGMGRGGTLSAGAKPYKSSTVHAP
LHPQQQQQQQQQQDKHLSHQQQQQQQGSLSRSHSRDLSNLGVSGEDGGRG
GGNGPWSRGVDLPPSLDLDRLFLLPSNDGGAQ*
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Synonyms
Publications