jgi.p|Nanoce1779_2|661161, gene_10167 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|661161
Unique Namegene_10167
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_48:21867..28530 +

Link to JBrowse

Properties
Property NameValue
TranscriptId661247
ProteinId661161
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:21867..28530 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL068ncniL068Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00090NO02G00090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|661161mRNA_10167-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|661161mRNA_10167Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|661161

>mRNA_10167-protein ID=mRNA_10167-protein|Name=jgi.p|Nanoce1779_2|661161|organism=Nannochloropsis oceanica|type=polypeptide|length=1058bp
MTCHHYHGVDGGGRGCRHKAVSALHKTSISKKKTGAMKGKKREGSMDGFL
LPGAKSHYAPDLMILPVHQDIHLDLTQIPQKTLKGVVDITFACQSPTEGR
KVVLDAVAFAELEVGSLDAAFPVSYRYDGKKVQVVWDAAWEVGEKRRVRV
LYTVTEPVAGMHFFGDGDASNGPTYVLSDHETEKARYWLPCLDLPVVRTS
ASFHLTTLPHHLAFANGVLVEDWMEGTGGTAAPAGAPAAEGATKTTHWRL
DFLCPSYLLCVAAGALLVAKEESEESKDLLPSCPIAYIAPVGVEEEKLRL
AFQPTARMLHWLANKVGNGSFVFPKYYQVMGDAHESAMENISLVSWGLNW
LMDETLLKEDRLLMNSINVHEIGHSYFGDSLVIQHFEHAFLKESWATYIE
CCWLEDTEGQDAFLFQLYTDMRAYITEVEDDYARPIVTRTYNSSWSMYDA
HLYPGGSCRLHMLRKLLGDGVFWKAIRTYVDRHMQKVVETSDFRKCLEEV
SGRSLVRFFEQWFYSPSFPQLTGEWDYDEETKNITLTIEQANSTSSDNED
EDENKDGAASLFDVAFKIEVYNKDGALETTFRPSLTRTKPKVVLQAQVLR
SPCYLHVNPQLATVLTLDLECEEKVLAATAQHATDVPSRIWAYEQLIKKV
ATPSAMTLIRKRIPAESFWGVRVAVADLLSDNPSRPSAQILAEQLKSEKD
PRALYHIAEACGSFRHALLREALLEVLGRGVKLYRAKAELYASLGAQNDA
RDLPLLLNACLETETPVGATNNPNLLETNIVRSGALRGLSYLHAAIDPVS
TTGSSSGTVTAYSYLHSRLINGGIKESQLPVRVETVEAFARAASYVQDKS
TREEAARLLAELLMEENIRVAETAARALPEFLPLEAGYYGSELSSLRHRL
PVQEHFSLDRMLRDLEDDNEEATPLQKLRKKMERWEERVGRWEEALEEHV
ADGKKHLVKGRKEKKNGGKEEGSSEEDDSGSSDESESESESESESESDRK
GGGGGGGRGAGKKKKHHVHAHTNRQHWGGGGGRGGGRGGGHKHGHHSRGG
GGDGGEQ*
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Synonyms
Publications