jgi.p|Nanoce1779_2|309485, gene_10119 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|309485
Unique Namegene_10119
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_43:35581..40829 -

Link to JBrowse

Properties
Property NameValue
TranscriptId309571
ProteinId309485
Product nameWD40-repeat-containing domain protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_43supercontigscaffold_43:35581..40829 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL063ncniL063Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO27G00160NO27G00160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|309485mRNA_10119-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|309485mRNA_10119Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|309485

>mRNA_10119-protein ID=mRNA_10119-protein|Name=jgi.p|Nanoce1779_2|309485|organism=Nannochloropsis oceanica|type=polypeptide|length=592bp
MDSSMPFELVAELRGHDGSVRTMCVLGGEEGGHQQLISGGDDGTIKRWLR
AETGSHIAFECIETITEAEHWLLALLPLPPGMITEAPQGGFIAASQDKMI
RVYDVEGKRLRLLVGHQHGVISLSWTAGGQLVSGSWDGTAKVWDVETGQV
LFTLGEHENGVCVLGLPNGDIATGSTGREEGGKIVDVQIRLWREGKVFKT
AREHTGPVRSLALWPDVGFLSTSNDGSVRLYSFDGEPLSSVQAPPGPDGS
PPFVYRAAPFSGPCGVMEVAAAGEDGAVNVWRGETLIQRIQHPRGLWTVL
SSGSPTGGEGGREGTPLFDGPGMEEVSFFSPIPSLPPSLPPALPPSLDTE
LVTGCHDGVIRVFSRDPTKQGPEELRAAFVQAGKEALEKQAKGGAGGPTA
EEVASLPPWEDRQSQHGKKDGSIQLFRKGGTAIAASWSAEILTWVEIGEV
TGSSNAGSVNGVVYDHVFPIELEQPGGAGVQNLQIGYNNNQNPFQAAQTF
IDAHMLPQRYLSEIADYISQRAGQAAPIIGGGAGRCVSLCFFCCYCLHLH
RTAPLPPFPSFGRPLLSPGWICRFRRRPARQDLGEDATFFQ*
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Synonyms
Publications