jgi.p|Nanoce1779_2|308738, gene_10050 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|308738
Unique Namegene_10050
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_42:169600..174165 +

Link to JBrowse

Properties
Property NameValue
TranscriptId308824
ProteinId308738
Product nameProtein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_42supercontigscaffold_42:169600..174165 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004719protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL062ncniL062Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01420NO23G01420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|308738mRNA_10050-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|308738mRNA_10050Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|308738

>mRNA_10050-protein ID=mRNA_10050-protein|Name=jgi.p|Nanoce1779_2|308738|organism=Nannochloropsis oceanica|type=polypeptide|length=594bp
MLMLKCWLVTLSLFYILLSFLYFYTYVQACRGGSLSTRPTVPSSHNQVII
SEQEIKIINMAYRSSGANNDELVENLKSFGIIHTPRVYQALRHVDRGEFM
PEEHRSQAYQDQPFCINHFHLSAPHIYGSVLEALDLQPGVAFLNIGSGTG
YLSTVAGLLLEGRGVNHGLEIEGELLSYARRAHAVFCHKEEERTASRRTV
TSATFFQGNVYELDEEKSMRYDRVYIGAACPESMKDKLLSLLLPGNGVLV
GPMGDELVKITRGRKEGEYTTTVLSAVRFASLKEPGPPSRRFHLPAPLWT
PVLHYTYPRTFQLAAKALLLLGAGKRRGGKKVGRAVPPAVWMEVLSFVDR
QWFEPEPGCGVGSSALKRKHATSSSLSSSSSSSILQHLDTICTLFFPVSP
PSPFSSLPTSSTTTVDSMQCSSSSSSSSSSSSSSSSNNNNSSSNGNSFGH
YNEQEENEEEEEEEEEEEEEEGTEGGMDNHPQSVVSFQALFPPPPRSTVV
MMGEAAGGGGGGGGGGGMRDLLLSFFTVGIPLSSPSSFASSASVVVAAAA
ATPSVQGGDGHYYRDENEDKKQLAGQKRGERRQSARLQQQHRQ*
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Synonyms
Publications