jgi.p|Nanoce1779_2|307491, gene_10011 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|307491
Unique Namegene_10011
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_42:33900..37591 +

Link to JBrowse

Properties
Property NameValue
TranscriptId307577
ProteinId307491
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_42supercontigscaffold_42:33900..37591 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL062ncniL062Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|307491mRNA_10011-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|307491mRNA_10011Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|307491

>mRNA_10011-protein ID=mRNA_10011-protein|Name=jgi.p|Nanoce1779_2|307491|organism=Nannochloropsis oceanica|type=polypeptide|length=857bp
MTTTTSTPRWLQLIRGGASAAPVGKKKGTGKKKKAAAAAAAAAEKVPPPA
VAPEKEEKPAIVENAPTPRKVKNSFIVDEAVNEDHSMVALSKDTMARLDL
FQGDFVMLKGKKRKDTVCVAVPDDTLDDAHVRLTKTVRGNLRVHLSDAIS
LSKVEDVKTGKKVVVVPFADTIQGLKGDLFETFVEPYFKETYRPVRVGDT
FLARGGMRAVEFKVLSVEVEGGKEEGEESEGAKYCIVGDETEVEISEEAL
NREDDERLDELGYDDIGGCKKQLAMIRELVELPLRHPQLFRSVGIPPPRG
VLLYGPPGSGKTMIAKAVAAETNAYFFTINGPEIMSKMSGESESKLRKAF
EDAEKNAPAILFIDELDAIAPKRDKAGGEVERRIVSQMLTLLDGIKPSSN
VVVMAATNRPNQIDPALRRFGRFDRELDIGVPDDEGRLEVLKIKTRNMKL
SPDMDLALVAKDTHGFVGADIAQLCMEAALQCIREKMGDIDIDDEEIDAK
LLDSLMITNEHFRHAMSVCNPSALRETQVEVPDVTWEDVGGLEDVKRELA
ETIQYPVEYAAKYEKFGMPAARGVLFYGPPGCGKTLLAKAVANECGANFI
SIKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAKARGSGG
GGSEAGDRVINQILTEIDGVGARKSVFVIGATNRPDILDSAITRPGRLDQ
LVYIPLPDFGSRLSIFNANLRKSPVAPDVDLEAMSEATQGFSGADISEIC
QRAAKNAIRESIFAEVERARRIEEGLEEAKEEGEEEDPVPFITKLHFEEA
MGRARKSVSEADIRKYDAFNAQMKADRGFGEFKFGEGEGEEGTEGGEGGK
EEEDLY*
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Synonyms
Publications