jgi.p|Nanoce1779_2|667958, gene_1000 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667958
Unique Namegene_1000
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:976246..983441 -

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Properties
Property NameValue
TranscriptId668044
ProteinId667958
Product namephosphoribosylformylglycinamidine synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:976246..983441 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004642phosphoribosylformylglycinamidine synthase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006189'de novo' IMP biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04090NO02G04090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667958mRNA_1000-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667958mRNA_1000Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667958

>mRNA_1000-protein ID=mRNA_1000-protein|Name=jgi.p|Nanoce1779_2|667958|organism=Nannochloropsis oceanica|type=polypeptide|length=1448bp
MIRTLVRPVQRELQRGKGVVVAKQQQQHKRKMSGLVEKNYFVEEWNGRRE
ITEKTFKFDGKTVPSLIGLALIFPGFIYFVMKDELKKKYEKLGYNVKKGG
DRDMIPPLPRMASNGATKRQKTDSTMLHYFRTPGYADPHVTKLNFKIKAA
LPEVEAVDTEFCFNVQLAANAEPFSEQESERLQWILRETFEPSQTRPGGS
FLADALASGKDGLVGQIFEVGPRLTFSTAYSSNAVSVCQACGLGVINRLE
RSRRYLVWTKATLTDHQARAFVAQVHDRMTEMPYPEPLQTFETGLLPEQT
QVVPILEEGRPALEALNEKLGLGFDDWDLDYYTNLFTNRLQRNPTDVECF
DMGQSNSEHSRHWFFGGKIIIDGVEQPDTLFKMVKATLPKDKPNNSIIAF
YDNSRAIRGYPITTLKPQTPGRPCKMVEYSNIFHPTLTAETHNFPTGVAP
FPGAETGTGGRLRDVQACGRGNSTVAGMSAYCVGNLRIPGYVLPWEDATF
KYPGSMASPLDIEIEASNGASDYGNKYGEPVVSGYTRSFGQRLPNGERYE
FIKPIMFSAGVGNLNALHAQKDEPKPGMVVVKIGGPAYRIGMGGGAASSR
ASGEADAELDFNAVQRGDAEMENKLNRVLRSCIELAEKNPIVSIHDQGAG
GNGNVLKEIVEPLGASYDLRRIPSGDPTLSALEIWGAEYQENDCFLTTKE
DLPMVLAFAKRENCVIAAVGEVTEGGRVVVVDSKDGTTVVDLPLDLVLGK
MPQKEFPMTRVFMPLEPLSLPEGLTVEMALDRVLRLLAVCCKRFLTNKVD
RSVTGLVAQQQCVGPLHTPLANVGVVAQSLLSLTGVAVTSGEQPIKGLIN
PAAMARMTVAETITNIMWAKLSSLTDIKVAGNWMWAAKFEGEGPKMYDCC
EALRDILMAMGVGIDGGKDSLSMAARVEQEVVKSPGNLTIPAYCTVSDIT
KTVTPDLKRPDESSLVFVELDATKARLGGTALAQVYNQLGNETPDVEDPT
KLVALFTVTQHFIEERTLLAGHDRSDGGLATVLLEMAFAGNCGIDVDLVV
PAGSEKTALSTLFNEEVGIVLEVPTAKAESIAAAYMAQGLAASVIGRTTS
LKKCVVRVNTEVVIDADMPVLRDVWETTGFELEKLQCNPECAVQEREGLA
SRSGPKWTLTYTPEATPAAKMEAADKVKVAIIRQEGSNGDREMISAFYAA
GFEVFDVHVNDLLASTITLDSFQGIVFVGGFSYADVLDSAKGWAAVLKFN
PSVLAQLEAFKARSDTFSLGVCNGCQLMALLGWVPYPDHNVAEAAQPRFI
ENNSARFESRFTSVQIQESAAIMFTGMAGSSMGVWVSHGEGRVHFPTPET
QAFVVEKKLAPMKYVDDDNNATEVYPFNPNGSPLGIAALCSEDGRHLAMM
PHPERCYLGWQWPFLPKEWEGMKTGVGPWLRMFQNARSWCETHKAAT*
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Synonyms
Publications