Naga_100172g6, gene9743 (gene) Nannochloropsis gaditana

Overview
NameNaga_100172g6
Unique Namegene9743
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037260.1:74824..79793 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100172g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:74824..79793 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL100ngnoL100Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00080NO21G00080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna10041rna10041-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna10041rna10041Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna10041

>rna10041-protein ID=rna10041-protein|Name=rna10041|organism=Nannochloropsis gaditana|type=polypeptide|length=858bp
MHSSLVIESASDRRSLASLHKVLCCPIFSIGRSPPVHEFYGRFEGQSARI
RVTSVTGHVFSTDFPGQYSNWEAVDPVDLFKAPTRKEPTSKFITHHLASE
GKGADILVLWLDCDREGENICFEVIECMQSGFKAHTRILRAHFSAITPKD
IHRALQNLGVPNKDEALSVDARQELDLKVGVAFSRFQTRYFQGKYGDLDA
TLVSYGPCQTPTLGFCVQRHDEIQSFSPEKFWYLAAAVAKDGANVALEWG
RGRVFDHEVAHVFLHLVGEAGSVAVDKVQKSEQRRTKPTALNTVELLKEA
SKVLGMGPAQTMSVAERLYLSGYLSYPRTESTAYPESFDVRGALSLQVSH
PTWGDYAKGLLQEGVSRPRAGVDAGDHPPITPVRALDPTEFPGDMGRLYD
LVTRHFLASLSHDARFLQTKVLFSSECGESFSASGKIMIDPGYLAVLAQS
KDESKLPDFQEGDHFTFSSLGLGDGHTSPPGYLTESELIERMEKHGIGTD
ASISSHINNIVERNYVHVGDGRTLIPNPLGIVLVHGYLRIDADLVLPKVR
AQIESECTLIAKGQADMQSVVDHSLRNFEAKFRYFAEHIDLMDSLFEATF
SPLAATGKPLSRCGKCRRFMKYIHLKPQRLYCPICNETYALPQNGTIKLY
KELKCPLDDFELLLFSLGNAQGAQGKSFPLCPYCYSHPPFEGLSIMGCDS
CMHPTCKHSLTRNGVCPCPGESGAACPGTLVLDVNSYPNWKMACNRCNNL
VLFKGGNIHTIKPATSQYCEVCGSAVLTIEYQKDKSPLSGGETKIEGCVL
CHDILNTCTELAKGRHKHVAIARKDFAKRNRGRGRGRGRGRGRGGKGGAN
PLMSFEDF
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Synonyms
Publications