CPC24, gene96 (gene) Nannochloropsis gaditana

Overview
NameCPC24
Unique Namegene96
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:262805..266936 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100033g23
Gene biotypeprotein_coding
GeneCPC24
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:262805..266936 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005198structural molecule activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005794Golgi apparatus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00840NO02G00840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna98rna98-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna98rna98Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna98

>rna98-protein ID=rna98-protein|Name=rna98|organism=Nannochloropsis gaditana|type=polypeptide|length=979bp
MAPSGLPAVSSIETSCTVLFHTEKASAVQQEEIMRDLENPDVKYKIQALK
QTIMLLLSGENLPRVLMSVIRFCSSTNDHLLKKLLMLYWEVVPKYDGTSK
KLLSEMILVCNALRNDLNHPNEYVRGSMLRFLCKLREPDLLEPLIPSIKA
CLEHRHSYVRKNAALAILNIHRHVSSDLVPDAPELMQQFIQTETDSGARR
NAFLFLCSEAELVAIQFLTEHLDEVPRYGDGFALLVLELTRKVCRKDPAQ
KARFVRALFNLLQSDSAAVSYEAAWTLVSLSSAPTAVRAAASTYAQLLNS
QSDHNVKLIVLERLASLKQGHTRVVQENLMDILRALGSPNLDICRKTLEV
AMDLVSPRNIEEVVAVLKREVLRTQEGEQEKATVYRSMLIQAIHTCAARF
PEVADAVVHVLMDFLSGDGALDVIVFVRSIIEQYPAFRPSILNKLLQSFA
YIQGNTVLGVAVWILGEYAMEPTLRKEAFDCLLANAGQPPYLPKSTPAMK
EGVGEGGREGGNAPGQQLVSKSVVLADGTYATQVAMVPVPGGAGSGKLGA
EDKSSPAFRRALLEGDVFLGGLLVSSLTKLTVQALETAGPLDPECKEMQA
KTLLVACGVGRMAEVKAQGNVGAYADVLERITVCARVLLDPDSLSLVKDT
LLTKCKMSYAAFLKFKQEEAAKSDKARQGEKEGGLSALPDALINFRQLRH
FGVQTGDFDLYDGEDIQRATGAGAVKDEVGDWSKRLAHVYQLSGLADPVY
AEAYVTVHDYDIVLEILVINRTKATLTNLTVELATMGDLKLIERPQSHTI
GPQDQRIIRANIKVSSTETGHIFGTIVYENSSTAEKGTVNLNDIQMDIMD
YIRPASCSDEAFRAMWAEFEWENKVAINTTFLDLQAFLTHVVSSTNMECL
TPTSSLSGESAFLAANLYAKSVFGEDALVNLSVEKKDDADGRLSGYVRIR
SKTQGIALSLGDRITAIQRVGDVQEEIAA
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Synonyms
Publications