PGDH, gene9535 (gene) Nannochloropsis gaditana

Overview
NamePGDH
Unique Namegene9535
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:185796..189147 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100201g13
Gene biotypeprotein_coding
GenePGDH
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:185796..189147 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL094ngnoL094Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9822rna9822-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna9821rna9821-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9822rna9822Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna9821rna9821Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9822

>rna9822-protein ID=rna9822-protein|Name=rna9822|organism=Nannochloropsis gaditana|type=polypeptide|length=412bp
MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLIN
RESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPG
ESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVC
NVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISI
TSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEA
PALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPA
LNLHEGSVLKFRNKVGRAGEREGRREGGRAGERAVGSCIRVACPSILPLA
STTSLHVRIRPCQGAPVASAQSRTRDLSSISPLPSVWRPAHRFLFTGEGL
RERGNDRTLHAL
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protein sequence of rna9821

>rna9821-protein ID=rna9821-protein|Name=rna9821|organism=Nannochloropsis gaditana|type=polypeptide|length=487bp
MVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKAGKWERSKLMGTEL
AGKTLAVVGCGRIGQQVAKWGQAFDMKVVGFDPVLPAAAFKELGIQKCDL
EKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEM
DLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEA
QVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGR
VATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHG
TLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGA
TSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAGEREGRR
EGGRAGERAVGSCIRVACPSILPLASTTSLHVRIRPCQGAPVASAQSRTR
DLSSISPLPSVWRPAHRFLFTGEGLRERGNDRTLHAL
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Synonyms
Publications