Naga_100114g13, gene942 (gene) Nannochloropsis gaditana

Overview
NameNaga_100114g13
Unique Namegene942
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:886610..893639 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100114g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:886610..893639 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL052ngnoL052Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02500NO03G02500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna979rna979-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna979rna979Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna979

>rna979-protein ID=rna979-protein|Name=rna979|organism=Nannochloropsis gaditana|type=polypeptide|length=2251bp
MAAARLRTEPTRSQASGPPRTVLARSHPALRPRLSSLLRVLSLHKPPLDP
DKAFLERAATFDEITAATAGIDDQEFEDLAPGTCMKEMEVPPWDALLKAS
MRGGKMGNALKGEVKDAFYRLIRLAGQLAGDEGAVEAASGLLFEVAGSHH
ALERRGEFETLLQRPIKESTWLQAISWAEVLLSWYREVVSSSPGRTSGRP
APKASGKMWGSDVRFREDLDGIFELCESIQSIDRDEKDNGMGKRDDVTAT
GGAPTPCLPPNVEGRTLLVHCNEHVSTTGAEGLGATDLAKGILEILRRYT
GEGELQTGLFDLLGVEGFDFMGWILENVQALRRIKDRDLRQQGPRGMTDE
SGMRSSSIVARGPSRPPTVGPGVSIMTEEEKQREKERRKDERRARKRGKG
SFVREDLTEGGDTFASVTGGLYTAPLKFDALDEIDWVAILGFDPRQRAEG
AQLGEKELLPEGTRHFWGDRGKGLPPGAVKSYKPGFEQVHIPAPVRAAPV
GRCPLIDVATALEPWALPAFSGIQRLNRIQSEVFEAAYNSQENLLICAPT
GAGKTNIAMLALLALVREHVKGGRVERGPNLKAIYIAPMKALAQEVVAKF
SERLKGLGLVVRELTGDMQLTKREVEESHLIVTTPEKWDVVTRKGGEGSL
AAIVGLVIIDEVHLLADERGAVIESIVARSQRLVETSQRAMRLVGLSATL
PNYKDVGLFLRANPKRGLFHFGPEYRPVPLDMTFIGVTEKQKIRQLNLMN
DIAYARALDAIRQGHQVMIFVHSRKDTTRTAQAIKDKAAKMNTLSEFSCM
ATKAFAAYAPQVSKSRSDDLRQHFDAGLGIHHAGMLRPDRSLTERMFENG
AIRVLVCTATLAWGINLPAHTVLIKGTEVYSPDKGGFVDLSMLDVMQIFG
RAGRPQYDTSGEAVMITTHKALPRYLALLTEQMPIESAFIKQLPDHLNAE
IVSGTVTSVKEGAAWLAYTYLYIRMLKNPMAYGVTYEEAAQDPMLDAKRL
QLITQAARILDQNRMARFDPRSGNLAVTDMGRTASHYYIRHESVEQFNGL
LSQVLTEAQALHVLCAAKEFEEVKVRPEELDEIDKLRLSYCPLEVGAPVE
ESAGKANVLLQAYLSRARVHGFTIISDTNYVAQNAGRVGRALFEVCLRKG
WCSVAAGFLRICKSIDRRMWWHDNPLRQFETLSGDIIRKLEEKHASIAQL
LDMTAPEVGQLVHHMRSGKIILELARMLPCLELSASIQPITRGILRVTLK
IDAVFDWADRWHGSVEPWWIWVEDAENERVYHSEPWLLHKRQKDDTHVVA
FTIPIFEPLPPQYTVRAVSDRWVGAESSVTVSFRHLILPDRHPPHTDLLD
LAPLSKSVLQHEEFEGLYRFTHFNPIQTQAFHVLYHTDANVLVGAPTGSG
KTLLAELAVLRMLKMSAQASKGTDGHVRAKTVYIAPLKALARERLQEWRK
KLGKILGLVVLELSGDVTPDVAALKRADIIIATPEKWDGITRNWKKRDYV
GDVRLLIMDEIHLLGEDRGPVLEVIVSRMRYIAAQKHRSVRMLGLSTALA
NPQDLADWLGVGPEGLFNFRPSVRPIPMEVHVAGFPGRHYCPRMASMNKP
TFQAIMEHSPKKPALVFVSSRRQTRLTALEMISLCAQGDYPKQFLHMPED
EIADVVVTLRDAALRHTLVFGIGIHHAGLDDHDRITVENLFVTGKIQVLV
CTSTLAWGVNFPAHLVVIKGTEYFDGKTSRYVDFPVTDILQMMGRAGRPQ
FDTRGVACILVHEPKKNFIKKFLYEPFPVESSLKDVLHNHLNAEVSGGSV
QNKEQAMEYLTWTFFFRRLVMNPTYYSLEETAPEAVQSYLLELINGVFED
LEDAGCIEIDEDEFGIHSTVLGHIASYYYLDYRSVGTFRNALADLGLGEE
EMDVPVEYKAASIIPQLAGLLAEAQEYENLPVRHNEDLLNAGLAKNASWP
MQDYDMGSSNAKAYLLLQAHMQHMDLPISDYVNDTKSVLDQAPRIINAMV
DIAADEGMLPVALGTMRLAQMLMQACDDKSSPLLQLPSLRAVIQHREKDE
ISRWQQEDLRQWAQADQRALRRLLVGAGLTGVNVEEVAIELRRISLVTVV
GTRILVKGSVTGGDAFDATNAKPSSKVVPMSSSNRPLVMADQDYILEVTL
RCRRGQGSGPPLTRSRFNKHQAKQGGGSWWLALGEAEVELLALKRVTCSQ
RDGDMTVRLTFPAPVVSGHTLLHLHLCPDNFVGLDQRMAVHIEVGEEGGA
N
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Synonyms
Publications